Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., ribosomal large subunit pseudouridine synthase E from Pseudomonas syringae pv. syringae B728a

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 18/182 (9%)

Query: 67  RVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDGELAN 126
           R++ + KP   L    D EGR T+ D + KI G      GRLD ++ GLLL T DG+L  
Sbjct: 32  RLILFNKPFDVLTQFSDEEGRATLKDFI-KIPGI--YPAGRLDRDSEGLLLLTNDGQLQA 88

Query: 127 RLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGI------- 179
           R+  P  ++ + Y V+V G+ ++E+++ L  GVQL DG     +        +       
Sbjct: 89  RIADPKHKLAKTYWVQVEGEPSDEQLQQLRDGVQLNDGPTLPAEARQLDEPQLWPRNPPV 148

Query: 180 -------NHTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELD 232
                       +VI EGRNR+VRR+  + G    RL RVR GD  L+  L +G + E+ 
Sbjct: 149 RFRKSVPTSWLELVIKEGRNRQVRRMTAAVGLPTLRLVRVRIGDWTLE-GLDQGQYREVA 207

Query: 233 LK 234
            K
Sbjct: 208 AK 209