Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., 23S rRNA pseudouridine synthase F from Pedobacter sp. GW460-11-11-14-LB5

 Score =  105 bits (263), Expect = 1e-27
 Identities = 85/323 (26%), Positives = 160/323 (49%), Gaps = 24/323 (7%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQEE 63
           +L K ++ +G  SRRE +  I  G V +NGK A +G+++   + V+ ++GH +  K +  
Sbjct: 8   RLNKFISESGLCSRREADRYIEKGTVFINGKRAKVGDQVFAGDKVM-VNGHNIEPKEESN 66

Query: 64  VICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDGE 123
            I  +LA+ KP G   T  +   R  + D +      R   +GRLD ++SGL+  T +G+
Sbjct: 67  FI--LLAFNKPVGITSTT-EGSVRDNIVDYVN--HSERIFPIGRLDKDSSGLIFLTNNGD 121

Query: 124 LANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINHTF 183
           + N+++    + E+EY+V V   +TE+ +  +  GV +     R   V           F
Sbjct: 122 IVNKILRAGNKHEKEYVVTVNKPITEDFIFEMSNGVPILGVNTRKCKVRQIS----TFVF 177

Query: 184 YVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLRELV 243
            +++ +G NR++RR+ E  G  V++L+R R  +I L K +P G + EL  +++  + + V
Sbjct: 178 NIILIQGLNRQIRRMCEHFGYEVTKLERTRIMNINL-KGIPTGEFRELTEEEMKSITKSV 236

Query: 244 ELRPEKETVLNMAPDAATRKRERT-------RSQKIRRAVRRHEERISATPGRSGKAPAR 296
           E      +     P +A +K+          R ++ +++ +        + G+     + 
Sbjct: 237 E---NSSSEAKSKPKSAAKKKANAWEEIPELREEQPKKSFKAKSSG-QKSSGKKQTGHSG 292

Query: 297 RKPGGESSTRNKVANQQQSSRKP 319
            KP G+S+T N+  N + +  KP
Sbjct: 293 SKPTGKSNTGNR--NSKPAKGKP 313