Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., pseudouridine synthase family protein from Dechlorosoma suillum PS

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 83/243 (34%), Positives = 123/243 (50%), Gaps = 25/243 (10%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKV-AVLGERLEDDNAVVRIDGHVVSVKAQE 62
           +L KV++  G  SRRE +  I AG V V+GKV + LG R+       RI+    + K Q 
Sbjct: 294 RLSKVMSEQGLCSRREADEWIEAGWVKVDGKVVSELGSRIVP---TARIEVDPEARKHQA 350

Query: 63  EVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIR------GSRWISV--------GRL 108
           E +  +L  +KP G +  + +      V    P+ R      G+R+ S         GRL
Sbjct: 351 ESVTIIL--HKPIGYVSGQAEDGYEPAVVLVQPENRWEEDKGGTRFKSAHLRRLAPAGRL 408

Query: 109 DANTSGLLLFTTDGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARF 168
           D +++G+L+ T DG +A RL+     VE+EYLVRV G++ E  +  L  G+ L+    + 
Sbjct: 409 DIDSTGMLVLTQDGRVAKRLIGEDSTVEKEYLVRVEGELIENGLALLNHGLSLDGVKLKP 468

Query: 169 EDVMYAGGEGINHTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGW 228
             V +   E +      V+ EGR R++RR+ E  G  V  LKR+R G + L  KLP G W
Sbjct: 469 AHVSWQNEEQLR----FVLREGRKRQIRRMCELVGLKVVGLKRIRIGSVVLG-KLPPGQW 523

Query: 229 MEL 231
             L
Sbjct: 524 RYL 526