Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., pseudouridine synthase family protein from Dechlorosoma suillum PS

 Score = 96.3 bits (238), Expect = 6e-25
 Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 16/242 (6%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQEE 63
           +L+K+L   G G+R+E  AL+R G + + G V      +ED    V  +G   +V  Q  
Sbjct: 2   QLEKLLHSQGFGTRKECRALVRNGWLEIGGVV------VEDPFLEVDPEGFEFTVDDQPW 55

Query: 64  VICRVLAY---YKPEGELCTRHDPEGRRTVFDRLPKIRGSRWIS-VGRLDANTSGLLLFT 119
              R  AY   +KP    C+ H P+  R++F  LP+   +R +  VGRLD +T+GLLL T
Sbjct: 56  RY-REKAYLMIHKPGDYECS-HKPKHHRSIFTLLPEELVNRDVQCVGRLDEDTTGLLLMT 113

Query: 120 TDGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGI 179
            DG+  +++  P R+V + Y +     + + ++  L+ GV L      +E V+    E +
Sbjct: 114 DDGQFIHQMSSPKRKVPKVYEITAKHSIDQAQIDQLLAGVLLH---GEYEPVVADSCELV 170

Query: 180 NHT-FYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNY 238
           + T   + I +G+  +V+R+  + G  V  LKRVR G + L   L  G W  L+ + +  
Sbjct: 171 SDTVLRLTITQGKYHQVKRMLGAVGNRVEGLKRVRIGALDLPADLAPGEWRWLEAEDLEK 230

Query: 239 LR 240
           L+
Sbjct: 231 LK 232