Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., pseudouridine synthase family 1 protein from Marinobacter adhaerens HP15

 Score =  114 bits (284), Expect = 4e-30
 Identities = 91/322 (28%), Positives = 160/322 (49%), Gaps = 27/322 (8%)

Query: 2   SEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQ 61
           S +L K ++ +G  SRRE +  I  G V +NGK A +G+++   + V +++G V+  +A+
Sbjct: 6   STRLNKYISESGMCSRREADRYIEQGNVYINGKRATVGDQVLPGDTV-KVNGQVIEPRAE 64

Query: 62  EEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRG--SRWISVGRLDANTSGLLLFT 119
           E+++   +A  KP G + T    E        + +  G   R   +GRLD ++ GL+  T
Sbjct: 65  EDLV--FIALNKPVGIVSTTDSAEKHN-----IQRFVGHSERIFPIGRLDKDSQGLIFMT 117

Query: 120 TDGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGI 179
           ++G+L N+++      E+EYLV V   VT E V  +  GV +   M +   V        
Sbjct: 118 SNGDLVNKILRAGNNHEKEYLVTVDKPVTREFVEGMANGVPILGTMTKKCKV----SRES 173

Query: 180 NHTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYL 239
              F + + +G NR++RR+ E  G  V++L+R+R  ++ L K L  G W +L  K++  L
Sbjct: 174 RFVFRITLVQGLNRQIRRMCEYFGYEVTKLERIRIMNVSL-KGLAVGQWRDLSEKELAGL 232

Query: 240 RELVELRPEKETVLNMAPDAATRKRERTRSQKIRRAVRRHEERISATPGRSGKAPARRKP 299
            + +     +      AP  A +  ++    K +    R +   ++TPG+ G A  R  P
Sbjct: 233 FDAIRDSSSE------APPGAGKPAKKKSGTKAKPKPDR-KPGSASTPGKPGGA-RRPGP 284

Query: 300 GGESSTRNKVANQQQSSRKPRG 321
            G+ +   K A    S ++P+G
Sbjct: 285 KGKPAPGKKPA----SGKRPKG 302