Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., pseudouridine synthase, Rsu from Marinobacter adhaerens HP15

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 15/240 (6%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQEE 63
           KL ++L+     SRR+   LI +GRV+VN           D  + VR+DG ++    QE 
Sbjct: 2   KLSRILSNRNDISRRQANFLIASGRVAVNDVTCRDAAAEVDRFSCVRMDGDII----QEA 57

Query: 64  VICRVLAYYKPEGELCTRHDPEGRRTVFDRL-PKIRGSRWISVGRLDANTSGLLLFTTDG 122
             C  L  +KP G L    D +  RTV + + P++R    I+ GRLD  ++GLL+ T DG
Sbjct: 58  EACHHLMLHKPAGFLSATLD-DTHRTVMELISPELREDLHIA-GRLDRASTGLLILTNDG 115

Query: 123 ELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINHT 182
             + +L  P  ++ + Y V     ++ E       G+  E     FE +  +  +    +
Sbjct: 116 RWSRQLTEPRIKIPKVYRVSTAYPISPETPHRFAEGIWFE-----FEQLTTSPADLDLLS 170

Query: 183 ---FYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYL 239
                V I EGR  +V+R++ + G  V+ L R + G+I LD  L  G +  L  +++N +
Sbjct: 171 PCEARVTIYEGRYHQVKRMFHAVGNRVTALHREQMGNIRLDDDLAAGEYRSLTAEEINLM 230