Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., RNA pseudouridylate synthase from Marinobacter adhaerens HP15

 Score = 76.6 bits (187), Expect = 4e-19
 Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 14/129 (10%)

Query: 106 GRLDANTSGLLLFTTDGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGM 165
           GRLD ++ GLLL T +G L +R+  PS ++ + Y V+V G+++EE +R+L  GVQL+DG+
Sbjct: 10  GRLDYDSEGLLLLTAEGSLQHRIASPSLKMPKTYWVQVEGNISEEALRHLASGVQLKDGL 69

Query: 166 AR-------FEDVMYAGGEGINHT-------FYVVINEGRNREVRRLWESQGTTVSRLKR 211
            R           ++     + H          + I EG+NR+VRR+  + G    RL R
Sbjct: 70  TRPAKADRMPAPTVWPRVPPVRHRDNIPTSWIELTITEGKNRQVRRMTAAVGFPTLRLIR 129

Query: 212 VRYGDIFLD 220
            R GD  LD
Sbjct: 130 YRIGDWTLD 138