Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., 16S rRNA pseudouridine(516) synthase from Klebsiella michiganensis M5al

 Score = 80.5 bits (197), Expect = 4e-20
 Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 15/232 (6%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQEE 63
           +L K +A+    SR      IR  RV+V+G +         D +   +  H V       
Sbjct: 2   RLDKFIAQQLGVSRAIAGREIRGSRVTVDGDIV-------KDTSFKLLPEHDVEYDGNTL 54

Query: 64  VICRVLAYY---KPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT 120
           V      Y+   KP+G +C+  DP+   TV   L      +  + GRLD +T+GL+L T 
Sbjct: 55  VQQNGPRYFMLNKPQGYVCSTDDPD-HPTVLYFLDVPVAHKLHAAGRLDIDTTGLVLMTD 113

Query: 121 DGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGIN 180
           DG+ ++R+  P    E+ YLV +   V E       +GVQL +     +  +    E + 
Sbjct: 114 DGQWSHRITSPRHHCEKTYLVTLENPVDETTAEQFAKGVQLHNEKELTKPAVL---EVVT 170

Query: 181 HT-FYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMEL 231
            T   + I+EGR  +V+R++ + G  V  L R R GDI LD  L  G +  L
Sbjct: 171 PTEVRLTISEGRYHQVKRMFAAVGNHVVGLHRERIGDIALDAALAPGEYRPL 222