Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., Ribosomal small subunit pseudouridine synthase A from Enterobacter sp. TBS_079

 Score = 81.3 bits (199), Expect = 2e-20
 Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAV-LGERLEDDNAVVRIDGHVVSVKAQE 62
           +L K +A+    SR      IRA RV+V+G +      +L+ D+ V   DG+ ++ +   
Sbjct: 2   RLDKFIAQQLGVSRAIAGREIRASRVTVDGDIVKDTAFKLQPDHQV-EYDGNPLTQQHGP 60

Query: 63  EVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDG 122
               R     KPEG +C+  DP+   TV   L +    +  + GRLD +T+GL+L T DG
Sbjct: 61  ----RYFMLNKPEGYVCSTDDPD-HPTVLYFLDEPVAHKLHAAGRLDIDTTGLVLMTDDG 115

Query: 123 ELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQL--EDGMARFEDVMYAGGEGIN 180
           + ++R+  P    E+ Y V +   V ++       GVQL  E  + R   +       + 
Sbjct: 116 QWSHRITSPRHHCEKTYRVTLESPVADDTAEQFANGVQLHNEKDLTRPAVLEVIAPTEVR 175

Query: 181 HTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQV 236
            T    I+EGR  +V+R++ + G  V  L R R G I LD +L  G +  L  +++
Sbjct: 176 LT----ISEGRYHQVKRMFAAVGNHVVGLHRERIGAIELDPELAPGEYRPLTEEEI 227