Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., Dual-specificity RNA pseudouridine synthase RluF from Enterobacter sp. TBS_079

 Score =  114 bits (284), Expect = 4e-30
 Identities = 86/303 (28%), Positives = 155/303 (51%), Gaps = 24/303 (7%)

Query: 2   SEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQ 61
           S +L K ++ +G  SRRE +  I  G V +NGK A +G+++   + VV+++G ++  +  
Sbjct: 6   STRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVVPGD-VVKVNGQLIEPRDA 64

Query: 62  EEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTD 121
           E+++   +A  KP G + T  D E R  + D +     SR   +GRLD ++ GL+  T  
Sbjct: 65  EDLV--FIALNKPVGIVSTTEDGE-RDNIVDFVN--HSSRIFPIGRLDKDSQGLIFLTNH 119

Query: 122 GELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINH 181
           G+L N+++      E+EY+V V   VT++ +R +  GV +   + +   V     +    
Sbjct: 120 GDLVNKILRAGNDHEKEYIVTVNKPVTDDFIRGMGAGVPILGTVTKKCKVK----KEAPF 175

Query: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLRE 241
            F + + +G NR++RR+ E  G  V +L+R R  ++ L   +P G W +L   ++  L  
Sbjct: 176 AFRITLVQGLNRQIRRMCEHFGYDVVKLERTRIMNVSL-SGIPLGEWRDLTDDELIELFR 234

Query: 242 LVELRPEKETVLNMAPDAATRKRERTRSQKIRRAVRR---HEERISATP-GRSGKAPARR 297
           L+E         N + +A  + + + ++Q I+R V +    EE+    P G+    P R+
Sbjct: 235 LIE---------NSSSEAKPKTKAKPKTQAIKRPVVKAPPSEEKSRGKPAGKRFVQPGRK 285

Query: 298 KPG 300
           K G
Sbjct: 286 KKG 288