Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., pseudouridine synthase from Ralstonia sp. UNC404CL21Col

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 14/238 (5%)

Query: 5   LQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDD-NAVVRIDGHVVSVKAQEE 63
           L ++L   G G+RR  + L+ AG V +NG      + L D    V+ +DG   +  A+  
Sbjct: 9   LYRILQSQGFGTRRYCKDLVLAGLVFINGVEMESPDALVDTAGLVLEVDGERWAYHARAY 68

Query: 64  VICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWIS-VGRLDANTSGLLLFTTDG 122
           ++       KP G  C++  P+   +V+  LP     R +  VGRLD +T+GLLL T DG
Sbjct: 69  LMLN-----KPAGVECSQK-PKHHPSVYTLLPVPLRERAVQCVGRLDQDTTGLLLLTDDG 122

Query: 123 ELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGIN-H 181
           +  + +  P  QV + Y +     VT+ ++  L  GV L D     E+V  A  E ++ H
Sbjct: 123 QFVHTITSPRHQVPKVYEITTAEPVTDAQIAQLCAGVLLAD---ENENVAAAWAERVDTH 179

Query: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLP-RGGWME-LDLKQVN 237
              + + +G+  +V+R+  + G  V+ L R   G + L    P    W+E  DL+ +N
Sbjct: 180 HLRMALTQGKYHQVKRMVAAAGNHVAGLHRSAIGGLSLGDLAPGEWRWLEAADLEALN 237