Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-) from Paraburkholderia bryophila 376MFSha3.1

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 12/236 (5%)

Query: 1   MSEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGER---LEDDNAVVRIDGHVVS 57
           ++  L+ +L   G GSRR+  ALI   RVS+ G +    +     +D +    +DG V  
Sbjct: 29  LAMNLESILFTQGFGSRRQCRALINDARVSIGGTLCTDADADFPTDDASFCFSVDGVVWP 88

Query: 58  VKAQEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWIS-VGRLDANTSGLL 116
            + +  ++       KP G  C+R DP+   +VF  LP     R +  VGRLD +T+GLL
Sbjct: 89  YRERAYLLLN-----KPPGYECSR-DPQHHLSVFSLLPPQFAERGVQCVGRLDQDTTGLL 142

Query: 117 LFTTDGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGG 176
           L + DG+  +    P R+V + Y+      + + ++  L  GV L  G ++    + A  
Sbjct: 143 LLSDDGKFVHMFTSPKRKVPKVYVATTRHAIDDAQLSALRNGVLLH-GESKPVAAVAADA 201

Query: 177 EGINHTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELD 232
            G  HT  + + EG+  +V+R+  + G     L R R G + L   L  G W  LD
Sbjct: 202 RG-EHTLALTVMEGKYHQVKRMIAAAGNRCEALHRERVGGLALPASLAPGAWQWLD 256