Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., pseudouridine synthase from Burkholderia phytofirmans PsJN

 Score =  236 bits (603), Expect = 8e-67
 Identities = 130/247 (52%), Positives = 166/247 (67%), Gaps = 2/247 (0%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQEE 63
           KL KVLA AG GSRR++E LI AGRVSVNG+ A +G+R+   + V RI+G  V  K   +
Sbjct: 213 KLHKVLAEAGMGSRRDMEELIVAGRVSVNGEPAHIGQRIMPTDQV-RINGKPVKRKLANK 271

Query: 64  VICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDGE 123
              RVL Y+KP GE+ +  DPEGR +VFD LP ++ ++W++VGRLD NT GLL+ TT G+
Sbjct: 272 PP-RVLLYHKPTGEIVSHADPEGRASVFDNLPPMKTAKWLAVGRLDFNTEGLLMLTTSGD 330

Query: 124 LANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINHTF 183
           LANR MHP   VEREY VRV G++ E   + L+ GV+LEDG A F  +   GGEG NH +
Sbjct: 331 LANRFMHPRYSVEREYAVRVVGELAEGMRQKLLNGVELEDGPANFLRIRDGGGEGTNHWY 390

Query: 184 YVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLRELV 243
           +V + EGRNREVRR++E+ G  VSRL R R+G I L K L RG W EL+  QV  L   V
Sbjct: 391 HVALAEGRNREVRRMFEAAGLMVSRLIRTRHGPISLPKGLKRGRWEELEDNQVRALMASV 450

Query: 244 ELRPEKE 250
            L+   E
Sbjct: 451 GLKAPTE 457