Pairwise Alignments

Query, 206 a.a., threonylcarbamoyl-AMP synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., translation factor SUA5 from Synechococcus elongatus PCC 7942

 Score =  144 bits (364), Expect = 1e-39
 Identities = 78/220 (35%), Positives = 123/220 (55%), Gaps = 20/220 (9%)

Query: 1   MSQFFYVHPENPQTRLINQAVAIIRNGGVVVYPTDSGYALGCQLENKHGMERICQIRRLD 60
           M++ + +HP++PQ + I      +R G V++YPTDS YA+GC ++++  ++R+ +I+ +D
Sbjct: 1   MAKHYRIHPDSPQPQQIAAIAEALRQGAVILYPTDSVYAIGCDVKDRAAVQRVRRIKEID 60

Query: 61  DKHNFTLLCRDLSELSLYARVDNTAFRLLKNNTPGPYTFIFKGTKEVPRRLMNEKRKTIG 120
           +    T +C  LS  + Y  + + AFRL++   PGPYTF+   T EVPR +MN KR+T G
Sbjct: 61  NDKPLTFICPSLSVAAQYGCISDRAFRLMRELVPGPYTFLLPATPEVPRVVMNPKRRTAG 120

Query: 121 IRVPNNKIALDLLEALGEPLMSTSLILPGND-----------FTESDPEEIRDRLEHAVD 169
           IR+PNN I   LL+AL  P++STS  L  +D                P E+   ++  VD
Sbjct: 121 IRIPNNPICQALLQALEGPIISTSAHLQPSDRKAPLAYEQGPHCPIAPAELFGEVDRLVD 180

Query: 170 VILN---------GGYLGQQPTTVIDFSDDEVVVARVGAG 200
           + +          G     Q +TV+D +DD  +V R G G
Sbjct: 181 ITIEVERQEMRILGADPDYQVSTVLDLTDDWPLVLRRGLG 220