Pairwise Alignments

Query, 290 a.a., PHP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., PHP domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  124 bits (312), Expect = 2e-33
 Identities = 81/265 (30%), Positives = 136/265 (51%), Gaps = 9/265 (3%)

Query: 3   IDLHSHTTASDGRFTYQQLIDRAVSFEIDVLAITDHDTVAALADARAYIAQQQYPLQLVN 62
           IDLHSH+TASDG  T  +L+ +A + ++  +A+TDHDT + L +A      +Q  ++++ 
Sbjct: 6   IDLHSHSTASDGSDTPAELVRKAAAAKLAAIALTDHDTTSGLDEAVR--EGRQRGIEVIR 63

Query: 63  GIEISTVWQNKDIHIVGLNIDPNSEA--LGQLIARQQQRRVERAELIAHRLQKATREGVL 120
           G E+    ++ ++HI+GL +  N  A  L   +A  ++ R  R   IA +L++   +   
Sbjct: 64  GCELGVRCEHGELHILGLWLPENGGATPLDATLADLRRHRAARNHRIAAQLRECGVDIEY 123

Query: 121 EEVQHIADGAPITRAHFAKWLVDNGYATNMQQVFKKYLTRDNPGYVPPNWCSMSEAVSAI 180
            EV+ I+ G  ++R HFA+ L + GY  + Q+ F +Y+      YV     S ++ V+ +
Sbjct: 124 AEVEAISGGESVSRLHFARILHEKGYVPSPQEAFARYIGPGGRAYVAKKTLSPTDGVALL 183

Query: 181 HAAGGQAVLAHPGRYDLT----AKWLKRLMTAFVEAGGDAMEVAQPQQSPQEKRTLGDYA 236
            + G    LAHP  +       A+WL   +      G DA+E    + S  + R   D A
Sbjct: 184 RSVGATVALAHPMLFRYPGNGFAEWLDDTVADLKPHGLDAIEAYHSEHSQADTRRCVDLA 243

Query: 237 MEYQLLASQGSDFH-YPSPWMELGR 260
             + L  + GSD+H    P + LGR
Sbjct: 244 ARHGLALTGGSDYHGAGKPGIALGR 268