Pairwise Alignments

Query, 290 a.a., PHP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., TrpH family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  293 bits (750), Expect = 3e-84
 Identities = 144/270 (53%), Positives = 188/270 (69%)

Query: 4   DLHSHTTASDGRFTYQQLIDRAVSFEIDVLAITDHDTVAALADARAYIAQQQYPLQLVNG 63
           DLHSHTTASDG  T  +L+ RA+   + + AITDHDTVA L++ARA+   Q  PL+L++G
Sbjct: 9   DLHSHTTASDGHLTPSELVARALEKGVQLFAITDHDTVAGLSEARAFNQAQAEPLKLISG 68

Query: 64  IEISTVWQNKDIHIVGLNIDPNSEALGQLIARQQQRRVERAELIAHRLQKATREGVLEEV 123
           +EIST W + DIHIV LN D     L + +A Q++ R +RAE I HRL KA  EG  E  
Sbjct: 69  VEISTRWNSYDIHIVALNFDETHAELLRFLAHQRELREQRAEEIGHRLAKAGIEGAYEGA 128

Query: 124 QHIADGAPITRAHFAKWLVDNGYATNMQQVFKKYLTRDNPGYVPPNWCSMSEAVSAIHAA 183
           + +A GA ++R H+A+WL DNG+A +M  VFK+YL R   GYVP NW  M+ A+  IH A
Sbjct: 129 KKLAAGAALSRGHYARWLADNGHAVDMPSVFKRYLARGKTGYVPNNWGDMASAIKVIHNA 188

Query: 184 GGQAVLAHPGRYDLTAKWLKRLMTAFVEAGGDAMEVAQPQQSPQEKRTLGDYAMEYQLLA 243
           GG AVLAHP  Y L+AKWLKRL+  F EAGGDAMEV   QQ+  ++  L   +++ QLLA
Sbjct: 189 GGLAVLAHPSGYKLSAKWLKRLVREFKEAGGDAMEVVLGQQTVDDRANLVALSVQNQLLA 248

Query: 244 SQGSDFHYPSPWMELGRNLWLPAGVEPVWK 273
           S GSDFH+PS W+ELG+NL+ P G++ VW+
Sbjct: 249 SIGSDFHFPSNWIELGKNLYQPQGIDWVWQ 278