Pairwise Alignments

Query, 396 a.a., tryptophan synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., tryptophan synthase subunit beta from Methanococcus maripaludis JJ

 Score =  493 bits (1268), Expect = e-144
 Identities = 232/393 (59%), Positives = 308/393 (78%), Gaps = 2/393 (0%)

Query: 3   KLNAYFGEFGGQFVPQILVPALDQLEQAFIDAQQDDAFRAEFMSLLQEYAGRPTALTLTQ 62
           K   YFGE+GGQF+P++L+PA+D+L++A+ + + D+ F+ E    L+ YAGR T L   +
Sbjct: 2   KCEGYFGEYGGQFIPEVLMPAIDELKEAYFELKDDEDFQNELSYYLKNYAGRETPLYYAE 61

Query: 63  NITKGTK-TKLYLKREDLLHGGAHKTNQVLGQALLAKRMGKHEIIAETGAGQHGVATALA 121
           N+TK     K+YLKREDLLHGGAHKTN  +GQALLAKRMGK  IIAETGAGQHGV T++A
Sbjct: 62  NLTKKLGGAKIYLKREDLLHGGAHKTNNTIGQALLAKRMGKTRIIAETGAGQHGVGTSMA 121

Query: 122 CALLGLKCRVYMGAKDVERQSPNVFRMRLMGATVIPVHSGSATLKDACNEALRDWSASYE 181
            AL GL+  ++MG  D ERQ PNVFRM+L+GA V PV +GS  LKDA NEA+R+W+A++E
Sbjct: 122 GALFGLETEIFMGRLDTERQQPNVFRMKLLGAKVTPVDTGSKVLKDAVNEAMRNWTATFE 181

Query: 182 TAHYLLGTAAGPHPFPTIVREFQRIIGEETKNQILAREGRLPDAVIACVGGGSNAIGMFA 241
             HYL+GT  GPHPFPTIVR+FQ +IG+E K QI+ +EGRLPD ++AC+GGGSNA+G+F 
Sbjct: 182 NTHYLMGTVMGPHPFPTIVRDFQSVIGKEVKKQIMEQEGRLPDHLVACIGGGSNALGLFH 241

Query: 242 DFIEEESVRLIGIEPAGKGIHTHQHGAPLKHGKTGIFFGMKAPLMQDEHGQVEESYSVSA 301
            FI+++ VR++GIE AGKG++T  HGA +  GK G+  GM +  +QDE GQ+EE+YS+SA
Sbjct: 242 AFIQDKDVRMVGIEAAGKGLNTSLHGASISKGKKGVLHGMLSYFLQDEDGQIEEAYSISA 301

Query: 302 GLDFPSVGPQHAYLNAIGRAEYESITDDEALDAFQALARNEGIIPALESSHALAHAIKMA 361
           GLD+P +GP+HAYL+  GRAEY S TDD+AL AF  L R+EGIIPALESSHA+A+AI+ A
Sbjct: 302 GLDYPGIGPEHAYLHDSGRAEYASATDDQALSAFMELTRSEGIIPALESSHAVAYAIENA 361

Query: 362 YAEPDKEQLLVVNLSGRGDKDIFTVHKLLEDKG 394
               DK++++V+NLSGRGDKD+ TV  +++ +G
Sbjct: 362 -GNMDKDEIMVINLSGRGDKDLNTVIDIMQKRG 393