Pairwise Alignments

Query, 396 a.a., tryptophan synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., tryptophan synthase, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  648 bits (1672), Expect = 0.0
 Identities = 323/391 (82%), Positives = 351/391 (89%), Gaps = 1/391 (0%)

Query: 3   KLNAYFGEFGGQFVPQILVPALDQLEQAFIDAQQDDAFRAEFMSLLQEYAGRPTALTLTQ 62
           KLN YFGE+GG +VPQILVPAL QLE AF++AQ D++F+AEF  LL+ YAGRPTALTLT+
Sbjct: 5   KLNPYFGEYGGMYVPQILVPALKQLESAFVEAQTDESFQAEFTDLLKNYAGRPTALTLTR 64

Query: 63  NITKGTKTKLYLKREDLLHGGAHKTNQVLGQALLAKRMGKHEIIAETGAGQHGVATALAC 122
           N++     K+YLKREDLLHGGAHKTNQVLGQALLAKRMGK EIIAETGAGQHGVATALAC
Sbjct: 65  NLSPNPMVKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALAC 124

Query: 123 ALLGLKCRVYMGAKDVERQSPNVFRMRLMGATVIPVHSGSATLKDACNEALRDWSASYET 182
           ALLGLKC+VYMGAKDV RQSPNVFRMRLMGA VIPV SGSATLKDACNEA+RDWS SYE 
Sbjct: 125 ALLGLKCKVYMGAKDVARQSPNVFRMRLMGAEVIPVTSGSATLKDACNEAMRDWSGSYEK 184

Query: 183 AHYLLGTAAGPHPFPTIVREFQRIIGEETKNQILAREGRLPDAVIACVGGGSNAIGMFAD 242
           AHYLLGTAAGPHPFPTIVREFQRIIGEETK QIL REGRLPDAVIACVGGGSNAIGMFAD
Sbjct: 185 AHYLLGTAAGPHPFPTIVREFQRIIGEETKKQILEREGRLPDAVIACVGGGSNAIGMFAD 244

Query: 243 FIEEESVRLIGIEPAGKGIHTHQHGAPLKHGKTGIFFGMKAPLMQDEHGQVEESYSVSAG 302
           FI+E +V LIG+EPAGKGI TH HGAPLKHGKTGIFFGMKAPLMQD  GQ+EESYS+SAG
Sbjct: 245 FIDETNVELIGVEPAGKGIDTHMHGAPLKHGKTGIFFGMKAPLMQDSEGQIEESYSISAG 304

Query: 303 LDFPSVGPQHAYLNAIGRAEYESITDDEALDAFQALARNEGIIPALESSHALAHAIKMAY 362
           LDFPSVGPQHA+LNAIGRA YES TDDEAL+AFQ LAR EGIIPALES+HALA+A+++A 
Sbjct: 305 LDFPSVGPQHAHLNAIGRARYESATDDEALEAFQLLARCEGIIPALESAHALAYALRLA- 363

Query: 363 AEPDKEQLLVVNLSGRGDKDIFTVHKLLEDK 393
            E  KE +LVVNLSGRGDKDIFTV  +L  K
Sbjct: 364 KECTKETILVVNLSGRGDKDIFTVSDILNGK 394