Pairwise Alignments

Query, 396 a.a., tryptophan synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., tryptophan synthase, beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  429 bits (1104), Expect = e-125
 Identities = 214/388 (55%), Positives = 280/388 (72%), Gaps = 3/388 (0%)

Query: 5   NAYFGEFGGQFVPQILVPALDQLEQAFIDAQQDDAFRAEFMSLLQEYAGRPTALTLTQNI 64
           N  FG+FGG+FV + L+P + +LE+ +  A+ D AF  E   L   Y GRP+ L   + +
Sbjct: 16  NGRFGDFGGRFVSETLMPLILELERQYEFAKTDQAFWDEMHHLWTHYVGRPSPLYFAERL 75

Query: 65  TKGTK-TKLYLKREDLLHGGAHKTNQVLGQALLAKRMGKHEIIAETGAGQHGVATALACA 123
           T+     K+YLKR++L H GAHK N VLGQ +LA+RMGK  IIAETGAGQHGVATA  CA
Sbjct: 76  TERLGGAKVYLKRDELNHTGAHKINNVLGQIILARRMGKTRIIAETGAGQHGVATATVCA 135

Query: 124 LLGLKCRVYMGAKDVERQSPNVFRMRLMGATVIPVHSGSATLKDACNEALRDWSASYETA 183
             GLKC VYMGA DVERQ+PNVFRM+L+GA V+PV SG  TLKDA N+ALRDW  +    
Sbjct: 136 KFGLKCVVYMGAHDVERQAPNVFRMKLLGAEVVPVTSGRGTLKDAMNDALRDWVTNVRET 195

Query: 184 HYLLGTAAGPHPFPTIVREFQRIIGEETKNQILAREGRLPDAVIACVGGGSNAIGMFADF 243
            Y +GT AGPHP+P +VR+FQ IIG+E + Q++  EGRLPD +IA +GGGSNA+G+F  F
Sbjct: 196 FYCIGTVAGPHPYPAMVRDFQAIIGQEAREQMMEAEGRLPDTLIAAIGGGSNAMGLFYPF 255

Query: 244 IEEESVRLIGIEPAGKGIHTH-QHGAPLKHGKTGIFFGMKAPLMQDEHGQVEESYSVSAG 302
           ++++ V +IG+E  GKG++   +H A L  G+ G+  G +  L+QD+ GQ+ E +S+SAG
Sbjct: 256 LDDKEVAIIGVEAGGKGVNEKMEHCASLTGGRPGVLHGNRTYLLQDDDGQILEGFSISAG 315

Query: 303 LDFPSVGPQHAYLNAIGRAEYESITDDEALDAFQALARNEGIIPALESSHALAHAIKMAY 362
           LD+P +GP+HA+L+ IGRA+Y SITD EALDAFQ     EGIIPALE SHALAH  K+A 
Sbjct: 316 LDYPGIGPEHAWLHDIGRAKYVSITDAEALDAFQLCCETEGIIPALEPSHALAHVAKIAP 375

Query: 363 AEPDKEQLLVVNLSGRGDKDIFTVHKLL 390
             P ++ ++ +N+ GRGDKDIFTV K L
Sbjct: 376 DLP-RDHIICMNMCGRGDKDIFTVAKAL 402