Pairwise Alignments

Query, 396 a.a., tryptophan synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., tryptophan synthase beta chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  381 bits (978), Expect = e-110
 Identities = 195/382 (51%), Positives = 263/382 (68%), Gaps = 4/382 (1%)

Query: 5   NAYFGEFGGQFVPQILVPALDQLEQAFIDAQQDDAFRAEFMSLLQEYAGRPTALTLTQNI 64
           + Y+GEFGG +VP+IL   +++L+  ++   + + F+ EF  LL++Y GRP+ L L + +
Sbjct: 9   DGYYGEFGGAYVPEILHKCVEELKNTYLGVLESEDFKKEFDQLLRDYVGRPSPLYLARRL 68

Query: 65  TKGTKTKLYLKREDLLHGGAHKTNQVLGQALLAKRMGKHEIIAETGAGQHGVATALACAL 124
           ++    K+YLKREDL H GAHK N  +GQ LLA+RMGK  IIAETGAGQHGVATA  CAL
Sbjct: 69  SEKYGCKMYLKREDLNHTGAHKINNTIGQILLARRMGKKRIIAETGAGQHGVATATVCAL 128

Query: 125 LGLKCRVYMGAKDVERQSPNVFRMRLMGATVIPVHSGSATLKDACNEALRDWSASYETAH 184
           + ++C VYMG  DVERQ  NV +M+++GATVIPV SG+ TLKDA NEA+RDW       +
Sbjct: 129 MDMECIVYMGKTDVERQHINVEKMKMLGATVIPVTSGNMTLKDATNEAIRDWCCHPADTY 188

Query: 185 YLLGTAAGPHPFPTIVREFQRIIGEETKNQILAREGR-LPDAVIACVGGGSNAIGMFADF 243
           Y++G+  GPHP+P +V   Q +I EE K Q++ +EGR  PD +IACVGGGSNA G    +
Sbjct: 189 YIIGSTVGPHPYPDMVARLQSVISEEIKKQLMEKEGRDHPDYLIACVGGGSNAAGTIYHY 248

Query: 244 IEEESVRLIGIEPAGKGIHTHQHGAPLKHGKTGIFFGMKAPLMQDEHGQVEESYSVSAGL 303
           I +  V +I  E  GKGI T    A ++ GK GI  G +  ++Q+E GQ+EE YS+SAGL
Sbjct: 249 INDGRVGIILAEAGGKGIETGMTAATIQLGKMGIIHGARTYVIQNEDGQIEEPYSISAGL 308

Query: 304 DFPSVGPQHAYLNAIGRAEYESITDDEALDAFQALARNEGIIPALESSHALAHAIKMAYA 363
           D+P +GP HA L A  RA   ++ DDEA++A   L + EGIIPALES+HAL  A+K    
Sbjct: 309 DYPGIGPIHANLAAQRRATVLAVNDDEAIEAAYELTKLEGIIPALESAHALG-ALKKLKF 367

Query: 364 EPDKEQLLVVNLSGRGDKDIFT 385
           +P  E ++V+ +SGRGDKDI T
Sbjct: 368 KP--EDVVVLTVSGRGDKDIET 387