Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Na+/H+-dicarboxylate symporters from Pseudomonas stutzeri RCH2

 Score =  215 bits (548), Expect = 2e-60
 Identities = 126/401 (31%), Positives = 214/401 (53%), Gaps = 12/401 (2%)

Query: 12  NIGVQVVIAMLAGTAVGAAMG--------HDATLFAPL--GAIFINLIKMLVIPLVAVAL 61
           ++ +Q++IA   G A+G   G         +  L+A    G+IFI L+KM++IPL+  ++
Sbjct: 3   SLNLQILIAACLGVAIGWLTGTLPTDAPVREGVLYASTLAGSIFIGLLKMVLIPLIFTSI 62

Query: 62  ISGAAGLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSE 121
           + G A L   H   +V    L YF +T++AA+ +AL+   LF+PG G+ +       +  
Sbjct: 63  VVGVANLQAHHQVHRVWGGALVYFTLTTSAAMLVALVAANLFKPGAGLSLDLFAEAMNDF 122

Query: 122 YAAQGELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAV 181
            A Q  LP F+      +  N F +L   +IL ++VF +F+GIA+       R+ ++  +
Sbjct: 123 EARQLTLPEFFLHFFANLFQNPFAALANGSILAVVVFAMFIGIALVAGGDRYRN-ILVVL 181

Query: 182 NTIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAY 241
              ++ M+ +I+ +M +AP+G+  L+   V     + L  V     +  A     G V  
Sbjct: 182 QEFLELMMRIISWIMRLAPLGILALLIKLVAEQDVALLSAVGGFIALVFATTLFHGTVVL 241

Query: 242 PVMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPL 301
           P ++ L +  S   F +  ++    A +T+SS ATLP+++   +++L VR   A FVLPL
Sbjct: 242 PGILFLATGKSPLWFFRGTREALITAFATSSSAATLPISLRCAEDNLKVRPGIAGFVLPL 301

Query: 302 GATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFL-VVA 360
           GAT+NM G A+Y    A+F A L  I+LS+     +  TA + + G  G+P    + +V 
Sbjct: 302 GATMNMDGTALYEAAAALFVANLMGIELSLAQQAVVFFTAMIASTGAPGIPSAGMVTMVM 361

Query: 361 VLLSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIV 401
           VL + G+P E + +L  +DR+ D +RTA+N+ GD   +V+V
Sbjct: 362 VLQAVGLPAEAVAILLPIDRLLDTVRTAVNVEGDIIGSVVV 402