Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., symporter for L-glutamate, L-glutamine, and L-aspartate (from data) from Shewanella amazonensis SB2B

 Score =  275 bits (704), Expect = 1e-78
 Identities = 148/365 (40%), Positives = 228/365 (62%), Gaps = 8/365 (2%)

Query: 38  FAPLGAIFINLIKMLVIPLVAVALISGAAGLGDSHSAGKVGAVTLSYFAITSAAAVALAL 97
           F  +G IFIN +KMLV+PLV ++L+ G   L +    G++G  TL+++  T+A A+ +A+
Sbjct: 48  FHVIGTIFINSLKMLVVPLVFISLVCGTCSLSEPSKLGRLGGKTLAFYLFTTAIALVVAI 107

Query: 98  IMGELFQPGVGVDVSGVESMFSSEYAAQGELPTFWATIIGMIPTNVFQSLNEANILQILV 157
               L QPG     S  ESM   +Y+A+ E P+    +I ++P+N  ++L+E N+LQI++
Sbjct: 108 SAAVLVQPGNASLAS--ESM---QYSAK-EAPSLADVLINIVPSNPMKALSEGNMLQIII 161

Query: 158 FCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFS 217
           F +  G AIS   +  R  V    + + + ++ ++  +M +AP GVF LM     T G  
Sbjct: 162 FAVIFGFAISHIGERGRR-VAALFDDLNEVIMRVVTLIMQLAPYGVFALMGKLALTLGME 220

Query: 218 ALMVVFKLFVVYVAAIAIFGFVAYPVMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATL 277
            L  V K F++ +  +   GFV YP +++LFS  S   FI+ M+  Q  A STASS ATL
Sbjct: 221 TLESVIKYFMLVLVVLLFHGFVVYPTLLKLFSGLSPLMFIRKMRDVQLFAFSTASSNATL 280

Query: 278 PVTMDTVKNDLGVRNSTASFVLPLGATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAI 337
           PVTM+  ++ LG  N  ASF LPLGATINM G AI  G+  +F AQ+F IDL++  Y  +
Sbjct: 281 PVTMEASEHRLGADNKVASFTLPLGATINMDGTAIMQGVATVFIAQVFGIDLTITDYAMV 340

Query: 338 IVTATLGAVGQAGVPGPSFLVVAVLLS-AGIPIEGLPLLFALDRIFDMIRTALNITGDAA 396
           ++TATL ++G AGVPG   +++A++L+  G+P+EG+ L+  +DR+ DM+RTA+N+TGD  
Sbjct: 341 VMTATLASIGTAGVPGVGLVMLAMVLNQVGLPVEGIALILGVDRMLDMVRTAVNVTGDTV 400

Query: 397 CAVIV 401
             V++
Sbjct: 401 ATVVI 405