Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  249 bits (635), Expect = 1e-70
 Identities = 149/389 (38%), Positives = 219/389 (56%), Gaps = 13/389 (3%)

Query: 16  QVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAAGLGDSHSAG 75
           +V+     G   G  +G  AT+  PLG +FI  IKMLV PLV  A++     LG S +  
Sbjct: 14  KVLAGFALGILTGVLLGESATVLKPLGDLFIAAIKMLVAPLVLCAIVVSITSLGSSSNLK 73

Query: 76  KVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYAAQGELPTFWATI 135
           ++   TL+ F +T   A  + L +G  F  G  + ++  E         +  +P F   +
Sbjct: 74  RLSFKTLALFMLTGTLASLIGLAVGSSFDMGGSMQLASTE-------VRERVVPGFAQVL 126

Query: 136 IGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMINKV 195
           + MIP N F SL    +LQI+VF   +GIAI+    EK +P+    +   + M  +   V
Sbjct: 127 LDMIPVNPFASLTNGKVLQIIVFAALVGIAINAVG-EKAEPLKKVFDAGAEVMFQLTRMV 185

Query: 196 MLIAPIGVFGLMADAVGTFGFSALMVVFKLFV-VYVAAIAIFGFVAYPVMIQLFSKTSAK 254
           + + PIGVFGLMA  VG +G S L+ + K  + +YVAA+    FV Y  +++  ++ S  
Sbjct: 186 LKLTPIGVFGLMAWVVGEYGLSTLLPLGKFIIAIYVAALIHIVFV-YGGLVKFAARLSPL 244

Query: 255 KFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSG-NAIY 313
           +F +     Q VA STASS  TLPVT    ++ +GV    ++FVLP+GAT+NM G   IY
Sbjct: 245 QFFRKAMPAQLVAFSTASSFGTLPVTTKCAES-MGVSKRYSAFVLPMGATMNMDGCGGIY 303

Query: 314 YGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLS-AGIPIEGL 372
             + AIF AQ++ I L M  Y+ I VTAT+ +VG AGVPG + +++ V L   G+P+EG+
Sbjct: 304 PAIAAIFIAQIYGIPLDMTDYMLIAVTATVASVGTAGVPGSAMVMLTVTLGVVGLPLEGI 363

Query: 373 PLLFALDRIFDMIRTALNITGDAACAVIV 401
             + A+DR+ DMIRT  N+TGD   AV+V
Sbjct: 364 AFIAAIDRVIDMIRTCTNVTGDMMTAVVV 392