Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., Sodium:dicarboxylate symporter (NCBI) from Rhodospirillum rubrum S1H

 Score =  196 bits (499), Expect = 9e-55
 Identities = 112/391 (28%), Positives = 202/391 (51%), Gaps = 7/391 (1%)

Query: 15  VQVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAAGLGDSHSA 74
           VQV++A++AG  +G       +   PLG  FI L+KM++ P++ + +++G AGL D    
Sbjct: 22  VQVLVAIVAGVLLGHFYPDLGSALKPLGDAFIKLVKMIIAPVIFLTVVTGIAGLTDMQKV 81

Query: 75  GKVGAVTLSYFAITSAAAVALALIMGELFQPGVG--VDVSGVESMFSSEYAAQGELPTFW 132
           G+V    + YF   S  A+ + +I+  +  PG G  +D + +++     Y +     +  
Sbjct: 82  GRVAGKAMIYFLSFSTLALIIGMIVANVVHPGSGLNIDPASLDAKAVQTYTSHAHDQSLV 141

Query: 133 ATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMI 192
             ++ +IP+    +    +ILQ+L F +  GIA++    E+  PV++ +N ++  +  ++
Sbjct: 142 GFLMNIIPSTPISAFASGDILQVLFFAVLFGIALA-TVGERGKPVLDLLNPLLQVVFRLV 200

Query: 193 NKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQLFSKTS 252
             VM  AP+G FG MA  +G +G  ++  +  L   +     +F FV    ++  ++  S
Sbjct: 201 AIVMKAAPLGAFGAMAFTIGKYGIGSIANLAMLVGTFYLTSGLFVFVVLG-LVARYNGFS 259

Query: 253 AKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSGNAI 312
               ++ +K+   + L T+SS A LP  M+ ++   G + S    V+P G + N+ G  I
Sbjct: 260 LLALLRYIKEELLLVLGTSSSEAALPTLMEKLER-AGCKKSVVGLVVPTGYSFNLDGTNI 318

Query: 313 YYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLSA--GIPIE 370
           Y  L A+F AQ  NIDLS+   I +++ A L + G AG+ G  F+ +A  LS    +P+ 
Sbjct: 319 YMTLAALFIAQATNIDLSLQDQILLLLVAMLSSKGAAGITGAGFITLAATLSVVPSVPVA 378

Query: 371 GLPLLFALDRIFDMIRTALNITGDAACAVIV 401
           G+ L+  +DR     R   N  G+A   ++V
Sbjct: 379 GMALILGVDRFMSECRALTNFIGNAVATIVV 409