Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  535 bits (1378), Expect = e-156
 Identities = 280/405 (69%), Positives = 326/405 (80%), Gaps = 1/405 (0%)

Query: 5   KTKGLLNNIGVQVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISG 64
           KT  LL NIGVQVVIAM+ G AVG  MG  A++FAPLG +FI+LIKMLVIPLV V++ISG
Sbjct: 4   KTSRLLGNIGVQVVIAMIIGAAVGFIMGEQASMFAPLGTLFIHLIKMLVIPLVLVSIISG 63

Query: 65  AAGLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYAA 124
           AA LGDS SAGK+G  T  +F ITS  AVALAL++G LFQPG GVD +   +    +   
Sbjct: 64  AASLGDSPSAGKIGIGTFGFFIITSGVAVALALLLGSLFQPGNGVDFTAHSASGLMKVTE 123

Query: 125 Q-GELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNT 183
           + G LP    T IGMIPTNVF+SL   NILQILVF +F GIA++K   E   P++ A+NT
Sbjct: 124 EHGALPGVMDTFIGMIPTNVFESLTGGNILQILVFSIFFGIALTKVKGEGSKPILAALNT 183

Query: 184 IVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPV 243
           IVDA VWMIN VM+IAPIGVFGLMAD+VGTFGF AL VVFKLF V+V  I +FGF+ +P+
Sbjct: 184 IVDAFVWMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVLGILLFGFLFFPL 243

Query: 244 MIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGA 303
           ++QLFS  SAKKFI  MKKPQ +ALSTASSMATLPV M+T + +LGV   TASFVLPLGA
Sbjct: 244 LVQLFSNVSAKKFISVMKKPQVMALSTASSMATLPVNMETCEEELGVSKPTASFVLPLGA 303

Query: 304 TINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLL 363
           TINMSGNAIYYGLVAIFFAQ++ IDLS+GAY+AII T+TLGA+GQAGVPGPSFLVVAVLL
Sbjct: 304 TINMSGNAIYYGLVAIFFAQMYGIDLSLGAYMAIIFTSTLGAIGQAGVPGPSFLVVAVLL 363

Query: 364 SAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMITEE 408
           +AGIPI+GLPLLFALDR+FDMIRT+LNITGDAACAVI+D     E
Sbjct: 364 AAGIPIDGLPLLFALDRVFDMIRTSLNITGDAACAVILDKYTKAE 408