Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  279 bits (713), Expect = 1e-79
 Identities = 144/362 (39%), Positives = 230/362 (63%), Gaps = 8/362 (2%)

Query: 41  LGAIFINLIKMLVIPLVAVALISGAAGLGDSHSAGKVGAVTLSYFAITSAAAVALALIMG 100
           +G+IFI+ ++MLV+PLV ++L+ G   L D  S G++G  T++++  T+A A+++A+++ 
Sbjct: 51  VGSIFISSLQMLVVPLVFISLVCGTCSLSDPSSLGRLGGKTIAFYLFTTAIALSMAILVA 110

Query: 101 ELFQPGVGVDVSGVESMFSSEYAAQGELPTFWATIIGMIPTNVFQSLNEANILQILVFCL 160
            L  PG    ++     +S +     E P+    +I ++P N  Q++ E N+LQI++F +
Sbjct: 111 LLVHPG-NASLAAENMQYSVK-----EAPSLSDVLINLVPRNPIQAMTEGNMLQIIIFAV 164

Query: 161 FLGIAISKQAKEKRDPVINAVNTIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALM 220
             G AIS    E+   V    N + + ++ ++  +M +AP G+F LM     T G     
Sbjct: 165 IFGFAIS-HIGERGKRVSALFNDLNEVIMRVVTLIMQLAPYGIFALMGKLALTLGLETFE 223

Query: 221 VVFKLFVVYVAAIAIFGFVAYPVMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVT 280
            V K F+V +A + +  FV+YPV+++LFS  S   FI+ M+  Q  A STASS ATLPVT
Sbjct: 224 SVVKYFMVVLAVLLVHAFVSYPVLLKLFSGLSPFTFIRKMRDVQLFAFSTASSNATLPVT 283

Query: 281 MDTVKNDLGVRNSTASFVLPLGATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVT 340
           ++T ++ LGV N  ASF LPLGATINM G AI  G+  +F AQ+F IDL++  Y  ++VT
Sbjct: 284 LETSEHRLGVDNKVASFTLPLGATINMDGTAIMQGVATVFIAQVFGIDLTITDYAMVVVT 343

Query: 341 ATLGAVGQAGVPGPSFLVVAVLLS-AGIPIEGLPLLFALDRIFDMIRTALNITGDAACAV 399
           ATL ++G AGVPG   +++A++L+  G+P+EG+ L+  +DR+ DM+RTA+N+TGD+   V
Sbjct: 344 ATLASIGTAGVPGVGLIMLAMVLNQVGLPVEGIALIMGVDRLLDMVRTAVNVTGDSVATV 403

Query: 400 IV 401
           I+
Sbjct: 404 II 405