Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  249 bits (637), Expect = 8e-71
 Identities = 148/389 (38%), Positives = 221/389 (56%), Gaps = 13/389 (3%)

Query: 16  QVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAAGLGDSHSAG 75
           +V+   + G  +G  +G  AT   PLG +FI  IKMLV PL+  A++     LG+  S  
Sbjct: 13  KVLAGFILGVGLGVVLGEQATQLKPLGDLFIAAIKMLVAPLIFCAIVVSITSLGNDVSLK 72

Query: 76  KVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYAAQGELPTFWATI 135
           ++   TL+ F +T   A  + L +G L   G  ++++  E         +  +P F   +
Sbjct: 73  RLSIKTLAMFMLTGTIASLIGLAIGSLIDMGGSLELATTE-------VRERNVPGFAQVL 125

Query: 136 IGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMINKV 195
           + MIP N F SL E  +LQI+VF   +GIAI+K   EK +P+   +    + M  +   V
Sbjct: 126 LDMIPVNPFASLAEGKVLQIIVFAALVGIAINK-IGEKAEPLKRTIEAGAEVMFQLTRMV 184

Query: 196 MLIAPIGVFGLMADAVGTFGFSALMVVFKLF-VVYVAAIAIFGFVAYPVMIQLFSKTSAK 254
           + + PIGVFGLMA  VG +G S L+ + K    +Y+AA+    FV Y  +++  +  SA 
Sbjct: 185 LQLTPIGVFGLMAWVVGEYGLSTLLPLGKFIGAIYIAALIHMVFV-YGGLVRFGAGLSAV 243

Query: 255 KFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSG-NAIY 313
           +F +     Q VA +TASS  TLP +    +  +GV     +FVLPLGAT+NM G   IY
Sbjct: 244 QFFRKAMPAQLVAFTTASSFGTLPASTRATET-MGVSKKYGAFVLPLGATMNMDGCGGIY 302

Query: 314 YGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLS-AGIPIEGL 372
             + AIF AQ++ I L M  Y+ I VTAT+ +VG AGVPG + ++++V L   G+P+EG+
Sbjct: 303 PAIAAIFIAQIYGIPLEMTDYMLIAVTATVASVGTAGVPGSAMVMLSVTLGVVGLPLEGI 362

Query: 373 PLLFALDRIFDMIRTALNITGDAACAVIV 401
             + ++DR+ DMIRTA N+TGD   AV+V
Sbjct: 363 AFIASIDRVIDMIRTATNVTGDMMTAVVV 391