Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  282 bits (721), Expect = 2e-80
 Identities = 153/410 (37%), Positives = 242/410 (59%), Gaps = 15/410 (3%)

Query: 15  VQVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAAGLGDSHSA 74
           +Q++I ML G   G  +G  A L  P+G +F+N IKML++PLV  +LI G   + D+   
Sbjct: 24  LQILIGMLLGICAGLGLGEQAVLLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMQDTAKM 83

Query: 75  GKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYAAQGELPTFWAT 134
           G++G  + +++  T++ A+ L L +G + QPG G+ ++  ES     + A  E+P+   T
Sbjct: 84  GRIGFKSFAFYLGTTSIAITLGLAVGHIMQPGAGLAMTSAES-----HNAVKEVPSIMET 138

Query: 135 IIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMINK 194
           +I ++PTN   +L    ILQ++VF + LGIA+       + P I    ++ +AM  + + 
Sbjct: 139 LINIVPTNPIAALASGQILQVIVFAVALGIALVLIGDHGK-PAIKVFESLAEAMYKLTDM 197

Query: 195 VMLIAPIGVFGLMADAVGTFGFSALMVVFKLFV-VYVA-AIAIFGFVAYPVMIQLFSKTS 252
           VM +AP GVFGLMA   G +G   LM + K+ + VY+  A+ I GF  Y +++   +K +
Sbjct: 198 VMKLAPYGVFGLMAWVAGEYGMDMLMPLIKVILAVYIGCALHIIGF--YSLVLTFVAKLN 255

Query: 253 AKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSGNAI 312
             +F + +    AVA +T+SS  TLP +M      LG+    +SFVLPLG TINM G A+
Sbjct: 256 PMQFFKGISNALAVAYTTSSSAGTLPASMKCASESLGINKKISSFVLPLGTTINMDGTAL 315

Query: 313 YYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVA-VLLSAGIPIEG 371
           Y G+ A+F AQ F IDL+   YI II+TATL ++G AGVPG   +++  VL + G+P+EG
Sbjct: 316 YQGVTALFVAQAFGIDLTWVDYITIILTATLASIGTAGVPGAGLVMLTLVLTTVGLPLEG 375

Query: 372 LPLLFALDRIFDMIRTALNITGDAACAVIV----DSMITEEAAAELEKRE 417
           + ++  +DRI DM RT +N++GD     ++    D +  E   A+ E+ +
Sbjct: 376 VAIIAGIDRILDMARTVVNVSGDLVATTVIAKSEDELDLEHYNADAEQSQ 425