Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., proton/glutamate symporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  232 bits (591), Expect = 2e-65
 Identities = 141/411 (34%), Positives = 222/411 (54%), Gaps = 15/411 (3%)

Query: 7   KGLLNNIGVQVVIAMLAGTAV-------GAAMGHDATLFAPLGAIFINLIKMLVIPLVAV 59
           K L   I + +   ++ GT V       G   G+   L + +G +F+N+I MLV+PLV V
Sbjct: 3   KSLSTRIFIGLFTGLILGTLVQYFLNDIGFFSGNLVELASGVGTMFVNMIMMLVVPLVFV 62

Query: 60  ALISGAAGLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFS 119
           +++ G   L D  S G++G  T  ++ + +  A++ AL++  L  PG GVD+S  + +  
Sbjct: 63  SIVCGVCELQDLKSFGRLGGKTFGFYIVNTVVAISTALLVVLLLDPGKGVDMSSADGVAI 122

Query: 120 SEYAAQGELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVIN 179
           +      ELP+  A +I ++P N   +    N+LQ++   L LG  + K   E     + 
Sbjct: 123 TAT----ELPSLIALLIDIVPRNPVAAFMSGNMLQVIFMALMLG-GVMKSLGEHVAGAVQ 177

Query: 180 AVNTIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFV 239
              T    M+ +I+ VM +AP GVF LM     T   +  M V +  V+ +A + ++ FV
Sbjct: 178 GFQTANKIMMKLISVVMSLAPFGVFALMFKLGATLDAAVFMSVLEYLVIILALLLLWIFV 237

Query: 240 AYPVMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVL 299
            YP+ + +F+  SAK F    ++    +LSTASS AT+PVTM T+   LGV  + A F +
Sbjct: 238 VYPLSVGMFTPISAKTFRAKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGV 297

Query: 300 PLGATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVV 359
           PLGAT+NM G AIY  +   F A  F + ++     +++ +  L +VG  GVPG   +++
Sbjct: 298 PLGATMNMGGVAIYITIAIFFVANAFGMPITSEQLPSLLFSIFLLSVGAGGVPGGGMVMI 357

Query: 360 AVLL-SAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMITEEA 409
            VL+   G+PIE   ++ ALDRI DM+ T+ N+ GD A   IVD   TE+A
Sbjct: 358 GVLIHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDTAVLTIVDQ--TEKA 406