Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., proton/glutamate symporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  283 bits (724), Expect = 7e-81
 Identities = 149/390 (38%), Positives = 238/390 (61%), Gaps = 11/390 (2%)

Query: 15  VQVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAAGLGDSHSA 74
           +Q+ + M+ G  VG  +G  A+   P+G +F+N IKML++PLV  +LI G   + D+   
Sbjct: 7   LQIFVGMVLGILVGVTLGEQASYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMEDTAKM 66

Query: 75  GKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYAAQGELPTFWAT 134
           G++G  + S++  T+A A++L L++G + QPG GV +   E++ +++     E+P+   T
Sbjct: 67  GRIGFKSFSFYLCTTAIAISLGLVVGYVIQPGAGVPLLQHEAVNTAK-----EVPSVMQT 121

Query: 135 IIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMINK 194
           +I ++PTN   +L    ILQ++VF + LGIA+       + P I    ++ +AM  + + 
Sbjct: 122 LIDIVPTNPVAALASGQILQVIVFAVALGIALVLIGDHGK-PAIKVFESLAEAMYKLTDM 180

Query: 195 VMLIAPIGVFGLMADAVGTFGFSALMVVFKLFV-VYVAAIA-IFGFVAYPVMIQLFSKTS 252
           VM +AP GVFGLMA   G +G   L  + K+ + VY+  I  + GF  Y ++++LF+K +
Sbjct: 181 VMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVLGF--YSIVLRLFAKLN 238

Query: 253 AKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSGNAI 312
              F + +    AVA +T+SS  TLP +M      LGV    +SFVLPLG TINM G A+
Sbjct: 239 PLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTAL 298

Query: 313 YYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLS-AGIPIEG 371
           Y G+ A+F AQ F IDL+   Y+ II+TATL ++G AGVPG   +++ ++LS  G+P+EG
Sbjct: 299 YQGVTALFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVMLTLVLSTVGLPLEG 358

Query: 372 LPLLFALDRIFDMIRTALNITGDAACAVIV 401
           + L+  +DRI DM RT +N++GD     ++
Sbjct: 359 VALIAGIDRILDMARTVVNVSGDLVATTVI 388