Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., proton/glutamate symporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  541 bits (1394), Expect = e-158
 Identities = 283/410 (69%), Positives = 331/410 (80%), Gaps = 1/410 (0%)

Query: 4   LKTKGLLNNIGVQVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALIS 63
           +K+K LL NIGVQVVIAM+ G  VG  MG  A++FAPLG IFI+LIKMLVIPLV V++IS
Sbjct: 1   MKSKSLLGNIGVQVVIAMIIGALVGFMMGESASIFAPLGTIFIHLIKMLVIPLVLVSIIS 60

Query: 64  GAAGLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYA 123
           GAA LGDS SAGK+G  T  +F ITS  AVALAL+MG +F PG GVD +   S    E  
Sbjct: 61  GAASLGDSPSAGKIGVGTFGFFIITSGLAVALALVMGSIFTPGAGVDFTAHSSSDLMEVT 120

Query: 124 AQ-GELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVN 182
            + G LP    T IGMIPTNVF+SLN  NILQILVF +F GIA++K   +   P++ A+N
Sbjct: 121 KEHGALPGVIDTFIGMIPTNVFESLNGGNILQILVFSIFFGIALTKVKGDGAKPIMAALN 180

Query: 183 TIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYP 242
           T+VDA VWMIN VM+IAPIGVFGLMAD+VGTFGF AL VVFKLF V+VAAI I+GFV +P
Sbjct: 181 TVVDAFVWMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFVFFP 240

Query: 243 VMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLG 302
           +++QLFSK SA++FI AMKKPQ +ALSTASSMATLPV M+T + DL V  +T +FVLPLG
Sbjct: 241 LVVQLFSKVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLG 300

Query: 303 ATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVL 362
           ATINMSGNAIYYGLVA+FFAQ++NIDLSM AY AII T+TLGA+GQAGVPGPSFLVVAVL
Sbjct: 301 ATINMSGNAIYYGLVAMFFAQMYNIDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVL 360

Query: 363 LSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMITEEAAAE 412
           L+AGIPI+GLPLLFALDR+FDMIRTALNITGDAACAVI+D    E+   E
Sbjct: 361 LAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACAVIMDKYTAEQLTQE 410