Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella sp. ANA-3

 Score =  229 bits (585), Expect = 9e-65
 Identities = 134/406 (33%), Positives = 219/406 (53%), Gaps = 17/406 (4%)

Query: 9   LLNNIGVQVVIAMLAGTAVGAAM-----------GHDATLFAPLGAIFINLIKMLVIPLV 57
           ++ ++  ++ I + AG  +G  +           G+   L   +G +F+N+I MLV+PLV
Sbjct: 1   MIKSLSTRIFIGLFAGLILGTLVQYFLNDIGFFSGNLVELAGGVGTMFVNMIMMLVVPLV 60

Query: 58  AVALISGAAGLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESM 117
            V+++ G   L D  S G++G  T  ++ + +  A++ AL++  L  PG GVD+S  + +
Sbjct: 61  FVSIVCGVCELQDLKSFGRLGGKTFGFYIVNTLVAISTALLVVLLLDPGKGVDMSSTDGV 120

Query: 118 FSSEYAAQGELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPV 177
             +      ELP+  A +I ++P N   +    N+LQ++   L LG  + K   E     
Sbjct: 121 AITAT----ELPSLMALLIDIVPRNPVAAFMSGNMLQVIFMALMLG-GVIKSLGEHVAGA 175

Query: 178 INAVNTIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFG 237
           +    T    M+ +I+ VM +AP GVF LM     T   +  + V +  V+ +A + ++ 
Sbjct: 176 VQGFQTANKIMMKLISVVMSLAPYGVFALMFKLGATLDAAVFISVLEYVVIILALLLLWI 235

Query: 238 FVAYPVMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASF 297
           FV YP+ +  F+  SAK F +  ++    +LSTASS AT+PVTM T+   LGV  + A F
Sbjct: 236 FVVYPLAVGFFTPISAKSFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGF 295

Query: 298 VLPLGATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFL 357
            +PLGAT+NM G AIY  +   F A  F + ++     +++ +  L +VG  GVPG   +
Sbjct: 296 GVPLGATMNMGGVAIYITIAIFFVANAFGMPITSEQLPSLLFSIFLLSVGAGGVPGGGMV 355

Query: 358 VVAVLL-SAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVD 402
           ++ VL+   G+PIE   ++ ALDRI DM+ T+ N+ GD A   IVD
Sbjct: 356 MIGVLIHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDTAVLTIVD 401