Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella sp. ANA-3

 Score =  538 bits (1386), Expect = e-157
 Identities = 278/408 (68%), Positives = 331/408 (81%), Gaps = 1/408 (0%)

Query: 4   LKTKGLLNNIGVQVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALIS 63
           +K+K LL NIGVQVVIAM+ G  VG  MG  A++FAPLG IFI+L+KMLVIPLV V++IS
Sbjct: 1   MKSKSLLGNIGVQVVIAMIIGALVGFTMGESASIFAPLGTIFIHLVKMLVIPLVLVSIIS 60

Query: 64  GAAGLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYA 123
           GAA LGDS SAGK+G  T  +F +TS  AVALAL+MG +F PG GVD +   S    E  
Sbjct: 61  GAASLGDSPSAGKIGVGTFGFFIVTSGIAVALALVMGNMFTPGAGVDFTAHSSSGLMEVT 120

Query: 124 AQ-GELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVN 182
           A+ G LP    T IGMIPTNVF+SL   NILQILVF +F GIA++K   +   P++ A+N
Sbjct: 121 AEHGALPGVMDTFIGMIPTNVFESLTGGNILQILVFSIFFGIALTKVKGDGAKPIMAALN 180

Query: 183 TIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYP 242
           T+VDA VWMIN VM+IAPIGVFGLMAD+VGTFGF AL VVFKLF V+VAAI I+GFV +P
Sbjct: 181 TVVDAFVWMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFVFFP 240

Query: 243 VMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLG 302
           +++QLFS+ SA++FI AMKKPQ +ALSTASSMATLPV M+T + DL V  +T +FVLPLG
Sbjct: 241 LVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPLG 300

Query: 303 ATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVL 362
           ATINMSGNAIYYGLVA+FFAQ++N+DLSM AY AII T+TLGA+GQAGVPGPSFLVVAVL
Sbjct: 301 ATINMSGNAIYYGLVAMFFAQMYNVDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAVL 360

Query: 363 LSAGIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMITEEAA 410
           L+AGIPI+GLPLLFALDR+FDMIRTALNITGDAACAVI+D    E ++
Sbjct: 361 LAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACAVIMDKYTAEPSS 408