Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Pseudomonas fluorescens FW300-N2E2

 Score = 75.9 bits (185), Expect = 4e-18
 Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 28/291 (9%)

Query: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFID------MRDREGIVQVVVDPDMA- 54
           R  YC  L K    +T E          + G I +D      ++D  G +QV V+     
Sbjct: 42  RDAYCDVLQKQYADKTKEELAEAAIPVKVAGRIMLDRGSFMVIQDMTGRIQVYVNRKTLP 101

Query: 55  -DVFAVANQLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLDFN 113
            +  A          I   G +    +  +  EM +  V LL +SL        LP   +
Sbjct: 102 EETLAAVKTWDLGDIIAAEGTLARSGKGDLYVEMTS--VRLLTKSLR------PLPDKHH 153

Query: 114 QKNSEEQRLKYRYLDLR-RPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEG 172
                EQR + RY+DL    ++    ++R++  + +R FL    FL++ETP+L +  P G
Sbjct: 154 GLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMKRDFLEVETPML-QTIPGG 212

Query: 173 ARDYLVPSRVHKGSF---YALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEF 229
           A     P   H  +      L  +P+L+ + L++ GF++ ++I + FR+E +     PEF
Sbjct: 213 AA--AKPFETHHNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNPEF 270

Query: 230 TQIDIETSFMTAEQVRAVTEKMIREMWLELLNVDLGDFPIMPYSEAMRRFG 280
           T ++   ++   E    +TE++ R    EL  + LG   + PY + +  FG
Sbjct: 271 TMLEFYQAYADYEDNMDLTEELFR----ELAQLVLGTTDV-PYGDKVFHFG 316



 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)

Query: 371 FLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKELGITNESAWAPLWV 430
           F+   +  +I++     T D  L   + A+ +A+  GA      K LG         L  
Sbjct: 319 FVRLSVFDSILKYNPELTADD-LNDIEKARAIAKKAGA------KVLGFEG------LGK 365

Query: 431 VDFPMFESDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYDMVLNGYEVGGGSVRI 490
           +   +FE   E  +   H     P  +SP   + +   ++++ +++ + G E+      +
Sbjct: 366 LQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSEL 425

Query: 491 HNAEMQSAVF-----DILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGT 545
           ++AE Q+  F     D      E       F+  AL++G PP AG   G+DRLVMLL  +
Sbjct: 426 NDAEDQAERFMAQVADKDAGDDEAMHYDADFVR-ALEYGMPPTAGEGIGIDRLVMLLTNS 484

Query: 546 ENIRDVIAFP 555
            +IRDVI FP
Sbjct: 485 PSIRDVILFP 494