Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., Lysyl-tRNA synthetase, class-2 from Pseudomonas syringae pv. syringae B728a

 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 28/291 (9%)

Query: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLI------FIDMRDREGIVQVVVDPDMAD 55
           R  YC  L K  V +T E          + G I      F+ ++D  G +QV V+     
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLP 101

Query: 56  VFAVANQLRSEF--CIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLDFN 113
              +A     +    I   G +    +  +  EM +  V LL +SL        LP   +
Sbjct: 102 EETLAEVKTWDLGDIIAAEGTLARSGKGDLYVEMTS--VRLLTKSLR------PLPDKHH 153

Query: 114 QKNSEEQRLKYRYLDLR-RPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEG 172
                EQR + RY+DL    E+ +  ++R++  + +R FL    FL++ETP+L +  P G
Sbjct: 154 GLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETPML-QTIPGG 212

Query: 173 ARDYLVPSRVHKGSF---YALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEF 229
           A     P   H  +      L  +P+L+ + L++ GF++ ++I + FR+E +     PEF
Sbjct: 213 AA--AKPFETHHNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNPEF 270

Query: 230 TQIDIETSFMTAEQVRAVTEKMIREMWLELLNVDLGDFPIMPYSEAMRRFG 280
           T ++   ++   E    +TE++ R    EL  + LG   + PY + +  FG
Sbjct: 271 TMLEFYQAYADYEDNMDLTEELFR----ELAQLVLGSTDV-PYGDKVFHFG 316



 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 23/187 (12%)

Query: 374 EEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKELGITNESAWAPLWVVDF 433
           + I++   E T A   DI     D A+ +A+  GA      K LG         L  +  
Sbjct: 326 DSILKYNPELTVADLQDI-----DKARAIAKKAGA------KVLGFEG------LGKLQV 368

Query: 434 PMFESDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYDMVLNGYEVGGGSVRIHNA 493
            +FE   E  +   H     P  +SP   + +    +++ +++ + G E+      +++A
Sbjct: 369 MIFEELVEHKLEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIANAYSELNDA 428

Query: 494 E-----MQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENI 548
           E      Q+ V D      E       F+  AL++G PP AG   G+DRLVMLL  + +I
Sbjct: 429 EDQAERFQAQVADKDAGDDEAMHYDADFVR-ALEYGMPPTAGEGIGIDRLVMLLTDSPSI 487

Query: 549 RDVIAFP 555
           RDVI FP
Sbjct: 488 RDVILFP 494