Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., lysyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score = 78.2 bits (191), Expect = 8e-19
 Identities = 72/256 (28%), Positives = 127/256 (49%), Gaps = 31/256 (12%)

Query: 35  FIDMRDREGIVQVVVDP----DMADVFA---VANQLRSEFCIKLTGEVRARPESQVNKEM 87
           F+ ++D  G +Q   D     D+ D +A   + + +  E  + L+G    + +  VN E 
Sbjct: 76  FLVLQDVSGRIQAYADKGVQADLKDRYAGLDIGDIIGVEGTLHLSG----KGDLYVNME- 130

Query: 88  ATGEVELLARSLEIINRSDVLPLDFNQKNSEEQRLKYRYLDLRRPEMS-DRIKLRAKASS 146
                ELL ++L        LP  F+    +E R + RY+DL   E S +  K+R+K  +
Sbjct: 131 ---RYELLTKALR------PLPEKFHGLTDQETRYRQRYVDLIVNEDSREAFKMRSKVVA 181

Query: 147 FVRRFLDTHGFLDIETPVLTKATPEGA--RDYLVPSRVHKGSFYALPQSPQLFKQLLMMS 204
            +R F+    F+++ETP++    P GA  R ++          Y L  +P+L+ + L++ 
Sbjct: 182 AIRNFMIKKEFMEVETPMM-HVIPGGASARPFVTHHNALDIEMY-LRIAPELYLKRLVVG 239

Query: 205 GFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQVRAVTEKMIREMWLELLNVDL 264
           GF+R ++I + FR+E L     PEFT ++   ++   + +  +TE+M+  +  EL    L
Sbjct: 240 GFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLIDLTEEMLSSIAKEL----L 295

Query: 265 GDFPIMPYSEAMRRFG 280
           GD   +PY E +  FG
Sbjct: 296 GDTK-LPYGEHVIDFG 310



 Score = 62.4 bits (150), Expect = 4e-14
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 5/148 (3%)

Query: 412 KAGKELGITNESAWAPLWVVDFPMFESDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALS 471
           K  K++GI  E+ W+   +++  +F    E  +         P ++SP   +++  + ++
Sbjct: 348 KLAKDVGIETETFWSCGQLLE-EIFGETAEPKLMQPTFITGYPADISPLARRSDGNDFIT 406

Query: 472 NAYDMVLNGYEVGGGSVRIHNAEMQSAVF----DILGITPEEQRLKFGFLLDALKFGTPP 527
           + ++  + G EV  G   +++AE Q   F    +      +E        + AL+ G PP
Sbjct: 407 DRFEFFIGGREVANGFSELNDAEDQDNRFKAQVEAKDAGDDEAMFYDADFITALEHGLPP 466

Query: 528 HAGLAFGLDRLVMLLCGTENIRDVIAFP 555
            AG   G+DRLVML   T  IRDVI FP
Sbjct: 467 TAGQGIGIDRLVMLFTNTHTIRDVILFP 494