Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., Aspartyl-tRNA synthetase (NCBI) from Rhodospirillum rubrum S1H

 Score =  433 bits (1113), Expect = e-125
 Identities = 247/594 (41%), Positives = 348/594 (58%), Gaps = 14/594 (2%)

Query: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61
           R+H C  L    VG+TV L GWV+R+RD G L+F+D+RD  G+ QVV D   A VF    
Sbjct: 5   RTHTCEQLRPENVGETVRLSGWVHRKRDHGNLLFVDLRDHYGLTQVVCDVSSA-VFKTLE 63

Query: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLDF--NQKNSEE 119
            +R+E  + +TG V AR     N ++ TG +E+ A+++E++++S+VLP+    +Q+  E+
Sbjct: 64  AVRAESVVSVTGTVVARTAETANAKLPTGAIEVKAQTVEVLSQSEVLPMQVAGDQEYPED 123

Query: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179
            RL YR+LDLRR ++   + LR+K  S +RR +   GFL+ +TP+LT ++PEGARD+LVP
Sbjct: 124 MRLTYRFLDLRREDVHANMVLRSKVISSLRRRMTDQGFLEYQTPILTASSPEGARDFLVP 183

Query: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238
           SR+H G FYALPQ+PQ FKQ+LM+SGFDRY+Q+  CFRDED RADR P EF Q+D E SF
Sbjct: 184 SRIHPGKFYALPQAPQQFKQMLMVSGFDRYFQVAPCFRDEDSRADRSPGEFYQLDFEMSF 243

Query: 239 MTAEQVRAVTEKMIREMWLEL---LNVDLGDFPIMPYSEAMRRFGSDKPDLRNPMELVDV 295
           +T E V A  E ++  ++ E      V    FP +PY EAM +FGSDKPDLRNP+   DV
Sbjct: 244 VTQEDVFAAIEPVLVGVFEEFGGDRAVTPAPFPRIPYDEAMLKFGSDKPDLRNPLRNADV 303

Query: 296 ADLLKDVDFKVFSGPANDPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355
            +   D  F +FS         V A+  PG A   R   D+   +    GA GL ++   
Sbjct: 304 TEHFADGGFGLFSKQI-ALGSVVRAIPAPGAAGRPRGWYDKLNEWARESGAGGLGYVVFE 362

Query: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGK 415
           +  AG +G   P+AK L  E ++AI +    + GD + F  D     A+  G +R +   
Sbjct: 363 E--AGPKG---PIAKNLEPERVEAIRQALDLKAGDSVFFACDKPLKAAKFSGLVRERICD 417

Query: 416 ELGITNESAWAPLWVVDFPMFESDDE-GNVAAMHHPFTSPLNLSPEQLKANPEEALSNAY 474
           +LG+     +   W VDFPM+E ++E G +   H+PF+ P          +P    +  Y
Sbjct: 418 DLGLRETGVFRFCWTVDFPMYEMNEETGQIEFSHNPFSMPQGEMEALETMDPLAIKAYQY 477

Query: 475 DMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFG 534
           D+V NG E+  G++R H  E+    F+I G   EE   +FG +L A KFG PPH G A G
Sbjct: 478 DIVCNGIELSSGAIRNHLPEIMYKAFEIAGYPKEEVEARFGGMLRAFKFGAPPHGGSAPG 537

Query: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588
           +DR+VMLL    NIR+VI FP    A  L+  AP+  +   L+EL I + L  K
Sbjct: 538 IDRIVMLLADEPNIREVILFPMNGQAQDLLMQAPNTVSDKQLKELHIKLDLPKK 591