Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) (from data) from Phaeobacter inhibens DSM 17395

 Score =  447 bits (1151), Expect = e-130
 Identities = 246/589 (41%), Positives = 357/589 (60%), Gaps = 13/589 (2%)

Query: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61
           RSH C  LNKS VG+TV L GWV+R RD GGL+FID+RD  G+ QV+ DPD + VFA   
Sbjct: 5   RSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPD-SPVFAEIE 63

Query: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLDF--NQKNSEE 119
           ++RSE+CI++ G V+AR ES VN ++ TGE+E+  R +E++ +S+ LPL     Q+  EE
Sbjct: 64  KVRSEWCIRIDGNVKARDESLVNDKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEYPEE 123

Query: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179
            RL+YRYLDLRR +M   + LR+     +RR +   GF + +TP++T ++PEGARD+LVP
Sbjct: 124 TRLRYRYLDLRREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEGARDFLVP 183

Query: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238
           SR+H G FYALPQ+PQ FKQL+M+SGFD+Y+QI  CFRDED RADR P +F Q+D+E SF
Sbjct: 184 SRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSF 243

Query: 239 MTAEQVRAVTEKMIREMWLEL---LNVDLGDFPIMPYSEAMRRFGSDKPDLRNPMELVDV 295
           +T + V    + +++ ++ E      VD  ++P + Y +A + +G+DKPDLRNP+++ D 
Sbjct: 244 VTQQDVFDTIQPVMQGVFEEFGKGRKVD-SEWPQVSYKDAAKWYGTDKPDLRNPIKMQDC 302

Query: 296 ADLLKDVDFKVFSGPANDPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355
           ++  +   F +F+    +    + A+  P G   +RK  D    F    G  G+ ++   
Sbjct: 303 SEHFRGSGFAIFANLLENEGTEIRAIPAPKGG--SRKFCDRMNKFAQGEGLPGMGYIFWR 360

Query: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGK 415
           D   GME    P+AK +  E  +AI ++     GD   F     K      G  R   G+
Sbjct: 361 DQGEGMEA-AGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFESVAGRARTVIGE 419

Query: 416 ELGITNESAWAPLWVVDFPMFESDDE-GNVAAMHHPFTSPLNLSPEQLKANPEEALSNAY 474
           ELG+T++  +A  W+VDFP++E D+E G +   H+PF+ P     + L ++P       Y
Sbjct: 420 ELGLTDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQG-GMDALLSDPLAVKGYQY 478

Query: 475 DMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFG 534
           D+  NGYE+  G++R H  E+    F+I G   EE   +FG +++A ++G PPH G A G
Sbjct: 479 DLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGGCAAG 538

Query: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583
           +DR+VMLL    NIR+VI FP    A  LM  APS      L EL + V
Sbjct: 539 IDRMVMLLADEANIREVIMFPMNQRAEDLMMSAPSEPMSDQLMELGLRV 587