Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., lysyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score = 78.2 bits (191), Expect = 8e-19
 Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 32/287 (11%)

Query: 24  VNRRRDLGGLI------FIDMRDREGIVQVVVDPDMA-DVFAVANQLRSEFCIKLTGEVR 76
           +N +R + G I      F+ ++D  G +Q     D+  D+ A    L     I +TG++ 
Sbjct: 59  MNVQRSIAGRIMAKRGPFLVIQDVSGRIQAYAGKDVQKDLKAKYQGLDIGDIIGVTGQLH 118

Query: 77  ARPESQVNKEMATGEVELLARSLEIINRSDVLPLDFNQKNSEEQRLKYRYLDLRRPEMSD 136
              +  +   M   E +LL ++L        LP  F+    +E R + RY+DL   E S 
Sbjct: 119 LSGKGDLYVNME--EYQLLTKALR------PLPEKFHGLTDQETRYRQRYVDLIVNEESR 170

Query: 137 R-IKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGA--RDYLVPSRVHKGSFYALPQS 193
               +R+K  + +R F+ +  F+++ETP++  + P GA  R ++          Y L  +
Sbjct: 171 AAFIMRSKVVTAIRNFMVSKEFMEVETPMM-HSIPGGASARPFITHHNALDIEMY-LRIA 228

Query: 194 PQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQVRAVTEKMIR 253
           P+L+ + L++ GF+R ++I + FR+E L     PEFT ++   ++   + +  +TE+M+ 
Sbjct: 229 PELYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLS 288

Query: 254 EMWLELLNVDLGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVADLLK 300
            +  +L    LGD   +PY E    FG        P E + + D +K
Sbjct: 289 SIAKDL----LGDTK-LPYGEHTIDFG-------GPYERLSMLDAIK 323



 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 5/145 (3%)

Query: 415 KELGITNESAWAPLWVVDFPMFESDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAY 474
           K LG+T E  W    +++  +F    E  +         P ++SP   + +    +++ +
Sbjct: 351 KSLGMTIEKFWTCGQLLE-EIFGETAEPKLMQPTFITGYPADISPLARRNDENHFITDRF 409

Query: 475 DMVLNGYEVGGGSVRIHNAEMQSAVF----DILGITPEEQRLKFGFLLDALKFGTPPHAG 530
           +  + G EV  G   +++AE Q   F    D      +E        + AL+ G PP AG
Sbjct: 410 EFFIGGREVANGFSELNDAEDQDKRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAG 469

Query: 531 LAFGLDRLVMLLCGTENIRDVIAFP 555
              G+DRLVML   T  IRDVI FP
Sbjct: 470 QGIGIDRLVMLFTNTHTIRDVILFP 494