Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., lysyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 20/222 (9%)

Query: 89  TGEVELLARSLEIINRS-DVLPLDFNQKNSEEQRLKYRYLDLR-RPEMSDRIKLRAKASS 146
           TGE+ L      ++ +S   LP  ++     E R + RY+DL   P   +  + R     
Sbjct: 129 TGELTLSCDQCILLTKSIRPLPEKYHGLKDVETRYRQRYVDLIVTPRTREIFRKRTLIVR 188

Query: 147 FVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSF---YALPQSPQLFKQLLMM 203
             RRFL+  GF+++ETP++ +  P GA    +P   H  +      +  +P+L+ + L++
Sbjct: 189 EFRRFLEDKGFMEVETPMM-QPIPGGAT--AMPFITHHNALDMQLYMRIAPELYLKRLLV 245

Query: 204 SGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQVRAVTEKMIREMWLELL--- 260
            GF++ ++I + FR+E +     PEFT  +   ++ T E +  +TE++   +  ++    
Sbjct: 246 GGFEKVFEINRNFRNEGISTRHNPEFTMCEFYWAYATFEDLMDLTEQLFAHVAEKVCGSY 305

Query: 261 -------NVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELV 293
                   VDL  G +  + + +++ + G  KP+  N  E V
Sbjct: 306 VVTYQGQEVDLTPGRWTRLSFHDSLEKIGGHKPEFYNDYEAV 347



 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 435 MFESDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYDMVLNGYEVGGGSVRIHNAE 494
           +F+ D EG +      +  P ++SP   + N    +++ +++ + G E+G     +++  
Sbjct: 371 LFDLDVEGKLIQPTFIYHYPTDISPLSRRNNERPDVTDRFELFITGRELGNAFSELNDPV 430

Query: 495 MQSAVFDILGITPEEQRLKFGFL----LDALKFGTPPHAGLAFGLDRLVMLLCGTENIRD 550
            Q   F       E    +  F+    L AL++G PP AG   G+DRLVMLL  + +IR+
Sbjct: 431 DQRMRFMDQVAEKEAGDAEAHFMDEDYLRALEYGMPPAAGEGVGIDRLVMLLTDSPSIRE 490

Query: 551 VIAFP 555
           VI FP
Sbjct: 491 VILFP 495