Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) (from data) from Desulfovibrio vulgaris Miyazaki F

 Score =  566 bits (1459), Expect = e-166
 Identities = 298/596 (50%), Positives = 400/596 (67%), Gaps = 15/596 (2%)

Query: 1   MRSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADV-FAV 59
           +RSH C  L  +  G  V L GWV  RRD GGLIF+D+RDR+G+ Q+V  PD+       
Sbjct: 23  VRSHDCATLTAADTGAEVCLMGWVQYRRDHGGLIFVDLRDRQGLTQIVFSPDVNPAAHER 82

Query: 60  ANQLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDV--LPLDFNQKNS 117
           A+ +RSE+ + + G VR RPE   N  M TGE+E+     +++N S      ++   + S
Sbjct: 83  AHIIRSEYVLAIRGTVRPRPEGMTNPGMKTGEIEVYVSEWKLLNTSKTPAFVIEDRTEAS 142

Query: 118 EEQRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYL 177
           E  RL+YRYLDLRRP M++   +R KA+   RR+LD  GFL+IETP LTK+TPEGARD+L
Sbjct: 143 ENLRLQYRYLDLRRPRMANNFIVRHKAAQATRRYLDELGFLEIETPYLTKSTPEGARDFL 202

Query: 178 VPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETS 237
           VPSR+++G FYALPQSPQLFKQLLMMSG +RYYQIV+CFRDED+RADRQ EFTQIDIE S
Sbjct: 203 VPSRLNQGQFYALPQSPQLFKQLLMMSGMERYYQIVRCFRDEDMRADRQLEFTQIDIEMS 262

Query: 238 FMTAEQVRAVTEKMIREMWLELLNVDLG-DFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296
           F+  EQV A+ E ++  ++ + L+ ++   FP M Y +AM R+G DKPD R  +EL DV 
Sbjct: 263 FVDEEQVMAMAEGLMARVFRDALDREIATPFPRMSYDDAMARYGVDKPDTRFGLELQDVT 322

Query: 297 DLLKDVDFKVFSGPANDPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356
            +++  +FK+F+         V A+ +PGG  +TRK+IDE+T FV IYGA+GLAW+K+  
Sbjct: 323 HIVRGSNFKLFA-----TAELVKAMRVPGGETMTRKEIDEFTEFVKIYGAQGLAWIKIRP 377

Query: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416
                +  QSP+AKFL++E    + +    +TGDI+ F A +  +V  ALG LR++ G+ 
Sbjct: 378 -----DEWQSPIAKFLSDEERAGLKDALGLETGDIVFFQAGAPGMVNAALGNLRVRLGEH 432

Query: 417 LGITNESAWAPLWVVDFPMFESD-DEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYD 475
           LG+ +E+A+  LWV DFP+FE D +E    A HHPFTSP +   + +  NP  A + AYD
Sbjct: 433 LGLIDENAFNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHMDVMVENPAAARARAYD 492

Query: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535
           MVLNGYE+GGGS+R H AE Q  +F  LG +PEE   +FGFL  AL+ G PPH G+AFG+
Sbjct: 493 MVLNGYELGGGSIRNHTAEKQRRMFAALGFSPEEAEAQFGFLTQALEMGAPPHGGIAFGM 552

Query: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATKDKA 591
           DRL MLL G+ +IRDVIAFPKT  A CL+T AP   +   L +L + ++   KD A
Sbjct: 553 DRLAMLLTGSSSIRDVIAFPKTQKATCLLTQAPDSVSARQLRDLGLRLRETGKDGA 608