Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., aspartate--tRNA(Asn) ligase from Methanococcus maripaludis JJ

 Score =  141 bits (355), Expect = 6e-38
 Identities = 90/264 (34%), Positives = 141/264 (53%), Gaps = 15/264 (5%)

Query: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMAD--VFAV 59
           RSHY   +   + GQ V L GWV+  R LG L F+ +RDR G +Q VV     D   F +
Sbjct: 9   RSHYSKDVIPEMDGQEVTLMGWVHSIRALGKLAFVILRDRAGTIQAVVPKQKVDEETFEI 68

Query: 60  ANQLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDV-LPLDFNQKNSE 118
           A +L  E  + + G+V       V  E A    E++   + ++N++D  LPLD ++K S 
Sbjct: 69  AKKLGKEDIVAIKGKV-------VANEKAPKGFEVIPIEIRVLNKADAPLPLDPSEKVSA 121

Query: 119 E--QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDY 176
           E   RL  R+LD+RRP++    K+R++    +R+     GF+++ TP L  +  EG  + 
Sbjct: 122 EIDTRLDKRFLDIRRPKIQAIFKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGGTEL 181

Query: 177 LVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQ-PEFTQIDIE 235
              S   K +F  L QSPQL+KQ++M  GFD+ ++I + FR E+    R   E   ID E
Sbjct: 182 FPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDSE 239

Query: 236 TSFMTAEQVRAVTEKMIREMWLEL 259
            SF+  +   A+ EK++   + ++
Sbjct: 240 MSFVNEKDAMAMLEKVVYNCYSDI 263



 Score = 62.4 bits (150), Expect = 4e-14
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)

Query: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTP 526
           +  +  A+D++    E+  G+ R+H  ++       +G+ P+     F   L+A K+G P
Sbjct: 346 DNKVCKAFDLMYKELEISSGAQRVHKYDLLVQNISNMGLNPDS----FETYLEAFKYGMP 401

Query: 527 PHAGLAFGLDRLVMLLCGTENIRDVIAFPK 556
           PHAG   G DR  M+L   +NIR+ + FP+
Sbjct: 402 PHAGWGLGADRFAMVLTAQDNIRECVLFPR 431