Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., aspartyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  563 bits (1452), Expect = e-165
 Identities = 299/588 (50%), Positives = 395/588 (67%), Gaps = 15/588 (2%)

Query: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMA-DVFAVA 60
           R+H C  L  + VG  V + GWV  RRD GGLIF+D+RDR+G+ QVV  PD A +    A
Sbjct: 24  RTHSCCELTAADVGNDVCIMGWVQYRRDHGGLIFVDLRDRKGLTQVVFSPDFAPEAHKDA 83

Query: 61  NQLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLP--LDFNQKNSE 118
           + +RSE+ + + G VR RPE   N  M TGE+E++    +++N S   P  ++   + SE
Sbjct: 84  HIVRSEYVLAIRGRVRPRPEGMTNPGMKTGEIEVVVSEWKLLNTSKTPPFLIEDRTEASE 143

Query: 119 EQRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLV 178
             RL +RYLDLRRP M+    LR +A+   RR+LD   FL+IETP LTKATPEGARD+LV
Sbjct: 144 NLRLAWRYLDLRRPRMARNFMLRHRAAQSARRYLDELDFLEIETPYLTKATPEGARDFLV 203

Query: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF 238
           PSR++ G FYALPQSPQ+FKQLLM+SG DRYYQIV+CFRDED+RADRQ EFTQIDIE SF
Sbjct: 204 PSRLNHGMFYALPQSPQIFKQLLMVSGMDRYYQIVRCFRDEDMRADRQLEFTQIDIEMSF 263

Query: 239 MTAEQVRAVTEKMIREMWLELLNVDLG-DFPIMPYSEAMRRFGSDKPDLRNPMELVDVAD 297
           +  E+V ++ E ++  +  + L VD+   FP M Y +AM  +G DKPD R  + L DV D
Sbjct: 264 VDEERVMSMAEGLMSRVMKDTLGVDVTVPFPRMTYDQAMGEYGVDKPDTRFDLRLKDVTD 323

Query: 298 LLKDVDFKVFSGPANDPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVNDL 357
            ++  +FK+F   A  P   V A+ +PGG  +TRK+IDE+T FV IYGA+GLAW+K+ + 
Sbjct: 324 AVRGSEFKLF---AKAP--LVKAMRVPGGETMTRKEIDEFTEFVKIYGAQGLAWIKIRE- 377

Query: 358 AAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKEL 417
                  QSP+AKFL+E    A++     + GDI+ F A    +V  ALG LR+K G+ L
Sbjct: 378 ----GEWQSPIAKFLSEAERAALVAALGLEVGDIVFFQAGEPGMVNAALGNLRVKLGQHL 433

Query: 418 GITNESAWAPLWVVDFPMFESD-DEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYDM 476
           G+  E  +  LWV DFP+FE D +E    A HHPFTSP +   + + ++P  A + AYDM
Sbjct: 434 GLIPEDTYNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHFDLMTSDPAAARARAYDM 493

Query: 477 VLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGLD 536
           VLNGYE+GGGS+RIH+AE+Q  +F  LG+ P+E   KFGFL+ AL+ G PPH G+AFG+D
Sbjct: 494 VLNGYELGGGSIRIHSAEVQRRMFAALGLDPQEAEEKFGFLIQALEHGAPPHGGIAFGMD 553

Query: 537 RLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVK 584
           RLVMLL G+ +IRDVIAFPKT  A CLMT AP   +   L +L I ++
Sbjct: 554 RLVMLLTGSPSIRDVIAFPKTQKATCLMTQAPDAVSARQLRDLGIRLR 601