Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., lysyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 78.2 bits (191), Expect = 8e-19
 Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 27/291 (9%)

Query: 20  LCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMA--DVFAVANQLRSEFCIKLTGEVRA 77
           + G +   R  G + F  + DR G +Q     +    + +    +L     + ++G +  
Sbjct: 93  MAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDIGDIVGVSGRLFR 152

Query: 78  RPESQVNKEMATGEVELLARSLEIINRSDVLPLDFNQKNSEEQRLKYRYLDLR-RPEMSD 136
               ++   ++  EV LL +S+        LP  ++     E R + RY+DL   P   D
Sbjct: 153 TKTGELT--LSCTEVRLLTKSIR------PLPEKYHGLKDVEIRYRQRYVDLIVTPRARD 204

Query: 137 RIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGA--RDYLVPSRVHKGSFYALPQSP 194
             + R       RRFL+  GF+++ETP++ +A P GA  + ++          Y +  +P
Sbjct: 205 IFRKRTIIVREFRRFLEARGFMEVETPMM-QAIPGGATAKPFVTFHNALDMQLY-MRIAP 262

Query: 195 QLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQVRAVTEKMIRE 254
           +L+ + L++ GF++ ++I + FR+E +     PEFT  +   ++ T E +  +TE++   
Sbjct: 263 ELYLKRLLVGGFEKVFEINRNFRNEGISTQHNPEFTMCEFYWAYATFEDLMDLTEELFSH 322

Query: 255 MWLELL----------NVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELV 293
           +  E+            VDL  G +  + + E++ + G   P+  N  E V
Sbjct: 323 IAREVCGSSVITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYNDYEKV 373



 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 435 MFESDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYDMVLNGYEVGGGSVRIHNAE 494
           +F+ D E  +      +  P ++SP   +      +++ +++ + G E+      +++  
Sbjct: 397 LFDLDVEPRLIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSELNDPV 456

Query: 495 MQSAVFDILGITPEEQRLKFGFL----LDALKFGTPPHAGLAFGLDRLVMLLCGTENIRD 550
            Q   F+      E    +  F+    L AL++G PP AG   G+DRLVMLL  + +IR+
Sbjct: 457 DQRMRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSPSIRE 516

Query: 551 VIAFP 555
           VI FP
Sbjct: 517 VILFP 521