Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., aspartyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  513 bits (1320), Expect = e-149
 Identities = 276/592 (46%), Positives = 390/592 (65%), Gaps = 19/592 (3%)

Query: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDM-ADVFAVA 60
           R+H CG L  S V + + L GWV R R +GG+ FID+RDR GI Q+V + ++ A++   A
Sbjct: 3   RTHTCGELRISDVNKQITLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCDRA 62

Query: 61  NQLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLP--LDFNQKNSE 118
           N+L  EF I++TG V  R     N  + TG++E++   L ++N +   P  ++ N    +
Sbjct: 63  NKLGREFVIQITGTVNERFSKNAN--IPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGGD 120

Query: 119 EQRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLV 178
           + R+KYRYLDLRR  +   ++LR K +  VR++LD+ GF+++ETPVL  +TPEGARD++V
Sbjct: 121 DIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFVV 180

Query: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF 238
           PSR++ G FYALPQSPQ  KQLLM+SGFDRY+QI KCFRDEDLRADRQPEFTQID E SF
Sbjct: 181 PSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSF 240

Query: 239 MTAEQVRAVTEKMIREMWLELLNVDLGD-FPIMPYSEAMRRFGSDKPDLRNPMELVDVAD 297
           +  E + +  E M + ++  L  V+L + F  MP+++AM+ +GSDKPDLR  M+ V++ D
Sbjct: 241 VEQEDIISTFEGMAKHLFKTLRGVELTEPFQRMPWADAMKYYGSDKPDLRFGMKFVELMD 300

Query: 298 LLKDVDFKVFSGPANDPKGRVAALCIPGGAALTRKQIDEYTAFV--AIYGAKGLAWLKVN 355
           ++K   F VF     D    V  +C  G A  TRKQ+D  T FV     GAKG+ + +V 
Sbjct: 301 IMKGHGFSVF-----DNAAYVGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVYARVE 355

Query: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIIL-FGADSAKVVAEALGALRLKAG 414
             A G   ++S V KF T+E++Q + E   A+ GD+IL    D      + L  LRL+ G
Sbjct: 356 --ADGT--VKSSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLEMG 411

Query: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNA 473
            +LG+ +++ +  LWV+DFPMFE S++EG + AMHHPFT P       L  +P    ++A
Sbjct: 412 SQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRADA 471

Query: 474 YDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAF 533
           YDMV+NG EVGGGS+RIH+A++Q+ +F+ILG TPE+ + +FGFL++A K+G PPH GLA+
Sbjct: 472 YDMVVNGVEVGGGSIRIHDAQLQARMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGLAY 531

Query: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKL 585
           GLDR V L  G ++IRD IAFPK  +   +M DAPS  +   L+EL + V +
Sbjct: 532 GLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDQTQLDELNLIVDI 583