Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., lysyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score = 75.5 bits (184), Expect = 5e-18
 Identities = 67/248 (27%), Positives = 119/248 (47%), Gaps = 38/248 (15%)

Query: 37  DMRDR-EGIVQVVVDPDMADVFAVANQLRSEFCIKLTGEVRARPESQVNKEMATGEVELL 95
           D++DR +G+       D+ D+  V  QL           +  + +  VN E    E +LL
Sbjct: 97  DLKDRYQGL-------DIGDIIGVTGQLH----------LSGKGDLYVNME----EYQLL 135

Query: 96  ARSLEIINRSDVLPLDFNQKNSEEQRLKYRYLDLRRPEMSDR-IKLRAKASSFVRRFLDT 154
            ++L        LP  F+    +E R + RY+DL   E S +   +R+K  + +R F+  
Sbjct: 136 TKALR------PLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVAAIRNFMIK 189

Query: 155 HGFLDIETPVLTKATPEGA--RDYLVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQI 212
             F+++ETP++    P GA  R ++          Y L  +P+L+ + L++ GF+R ++I
Sbjct: 190 KEFMEVETPMM-HVIPGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVGGFERVFEI 247

Query: 213 VKCFRDEDLRADRQPEFTQIDIETSFMTAEQVRAVTEKMIREMWLELLNVDLGDFPIMPY 272
            + FR+E L     PEFT ++   ++   + +  +TE+++  + +ELL         MPY
Sbjct: 248 NRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAIELLG-----SAQMPY 302

Query: 273 SEAMRRFG 280
            E    FG
Sbjct: 303 GEHTVDFG 310



 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 454 PLNLSPEQLKANPEEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVF----DILGITPEE 509
           P ++SP   + +    +++ ++  + G EV  G   +++AE Q + F    D      +E
Sbjct: 389 PADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQDSRFKAQVDAKDAGDDE 448

Query: 510 QRLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555
                   + AL+ G PP AG   G+DRLVML   T  IRDVI FP
Sbjct: 449 AMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494