Pairwise Alignments

Query, 323 a.a., tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., methyltransferase, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  419 bits (1076), Expect = e-122
 Identities = 200/323 (61%), Positives = 253/323 (78%), Gaps = 2/323 (0%)

Query: 1   MFNFANVYQQIAQHPQLQLWLNTLPQQLTDWQAK-QHGDLDRWMRNLKKIPVGQPEVIDL 59
           M +F++ Y+QIA   QLQ WL +LP  L +WQ + +HG+L +W + L K+    PE +DL
Sbjct: 1   MISFSSFYRQIAD-TQLQHWLESLPAILGEWQRQHKHGNLPKWEKVLAKLHYPAPEFLDL 59

Query: 60  KNAVAAHNHQPLAQGEQKKLEAVLKTFHPWRKGPYHLHGIHIDTEWRSDWKWDRLLPHIS 119
           K++V   +   L  G+ +KLE +LK   PWRKGP+H+HGIHIDTEWRSDWKWDR+ PH+S
Sbjct: 60  KDSVTIGDGLQLDSGQTEKLENLLKILQPWRKGPFHVHGIHIDTEWRSDWKWDRVSPHLS 119

Query: 120 PLKNRLVLDVGCGNGYHMWRMLGEGAQQVFGIDPSELFLIQFEAVRKLLGDDQRVHLLPL 179
           PL NR VLDVGCG+GYHMWRMLG GA++V GIDPS LFL QFEA+++L+  +  VHLLPL
Sbjct: 120 PLTNRTVLDVGCGSGYHMWRMLGAGAKRVVGIDPSALFLCQFEAIKRLIDTELPVHLLPL 179

Query: 180 GIEQMPELNAFDTVFSMGVLYHRRSPLDHLLQLKNQLVAGGELILETLVVEGDEHTVLVP 239
           GIE++P L+AFDTVFSMGVLYHRRSP+DHLLQL++QL  GGEL+LETLVV+GD+ TVLVP
Sbjct: 180 GIEELPPLDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRMGGELVLETLVVDGDKDTVLVP 239

Query: 240 FDRYAQMRNVYFFPSALALKVWLEKTGFVDVRIVDENITSLGEQRTTEWMTHNSLPDYVD 299
            DRY +M NV+F PS  ALK+WLEK  F DVR V+ ++TSL EQR+T WM + SL DY+D
Sbjct: 240 QDRYGKMNNVWFLPSIDALKLWLEKCDFTDVRCVNVDVTSLAEQRSTPWMQNESLVDYLD 299

Query: 300 PQDPSKTIEGYPAPRRAILIAKK 322
           P+D + T+EGYPAP+RA  IA K
Sbjct: 300 PKDVNLTVEGYPAPKRATFIAVK 322