Pairwise Alignments

Query, 323 a.a., tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., putative methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  429 bits (1102), Expect = e-125
 Identities = 207/323 (64%), Positives = 254/323 (78%), Gaps = 2/323 (0%)

Query: 1   MFNFANVYQQIAQHPQLQLWLNTLPQQLTDWQAK-QHGDLDRWMRNLKKIPVGQPEVIDL 59
           M +F++ YQQIA    LQ WL  LP  L  WQ + +HG+L +W + L K+    P+ ID 
Sbjct: 1   MISFSSFYQQIADS-NLQHWLEELPAILGQWQREHKHGNLPKWEKVLNKLHYPAPDRIDF 59

Query: 60  KNAVAAHNHQPLAQGEQKKLEAVLKTFHPWRKGPYHLHGIHIDTEWRSDWKWDRLLPHIS 119
              V   +   L++G+Q+KL+ +LK F PWRKGP+ LHGIHIDTEWRSDWKW+R+ PHIS
Sbjct: 60  TTRVEVGSGDQLSKGQQEKLKNLLKLFCPWRKGPFDLHGIHIDTEWRSDWKWERVQPHIS 119

Query: 120 PLKNRLVLDVGCGNGYHMWRMLGEGAQQVFGIDPSELFLIQFEAVRKLLGDDQRVHLLPL 179
           PLKNR VLDVGCG+GYHMWRMLG+GA++V GIDPS LFL QFEAV++L G+D  VHLLPL
Sbjct: 120 PLKNRTVLDVGCGSGYHMWRMLGDGAKRVVGIDPSPLFLCQFEAVKRLAGNDHPVHLLPL 179

Query: 180 GIEQMPELNAFDTVFSMGVLYHRRSPLDHLLQLKNQLVAGGELILETLVVEGDEHTVLVP 239
           GIEQ+P L+AFDTVFSMGVLYHRRSP+DHLLQL++QL  GGEL+LETLVV+GDE+TVLVP
Sbjct: 180 GIEQLPPLDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRTGGELVLETLVVDGDENTVLVP 239

Query: 240 FDRYAQMRNVYFFPSALALKVWLEKTGFVDVRIVDENITSLGEQRTTEWMTHNSLPDYVD 299
            +RY +M NV+F PSA AL+ WL+K  FVDVR VD ++TSL EQR+TEWM + SL DY+D
Sbjct: 240 GERYGKMNNVWFLPSAKALEAWLKKADFVDVRCVDIDVTSLAEQRSTEWMPNESLVDYLD 299

Query: 300 PQDPSKTIEGYPAPRRAILIAKK 322
           P D S T+EGYPAP+RA  IA K
Sbjct: 300 PNDVSLTVEGYPAPKRATFIAVK 322