Pairwise Alignments

Query, 140 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 6/138 (4%)

Query: 2   VLGEIESVTIDAIKQTFDARIDTGAATSSLNAVDIE----EFERNGKNWVRFHLADEKNP 57
           V+G+   +T+D     + ARIDTGA  +SL+A D+E      ++   N  +      +N 
Sbjct: 42  VIGQTAMMTVDEAGLVYQARIDTGAGNTSLHAFDLEIQGGSAKKMADNVGKTIWFTTENV 101

Query: 58  KTEANWIEAPVLRYVRIRQSTNDNTERRAVVELWVKLGSIHEKAQFTLADRSQMTHPVLL 117
             E   + A +++   +  S +  TE R +VE+ V       K +  L DR  M + +L+
Sbjct: 102 AGERKRLSAKIVKTSTV--SNSQGTETRYMVEMHVGFAGETRKVKVNLRDRGHMDYKLLI 159

Query: 118 GREFIRDIALVDVSRKYI 135
           GR +++   +VDVS K +
Sbjct: 160 GRNWLKGKYVVDVSEKRV 177



 Score = 60.1 bits (144), Expect = 3e-14
 Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 11/137 (8%)

Query: 2   VLGEIESVTIDAIKQTFDARIDTGAATSSLNAVD------IEEFERNGKNWVRFHLADEK 55
           V+G    ++I      FD RIDTGA  +SL+AVD      +E+ E+N    + F   +EK
Sbjct: 177 VIGARAPISILETGLLFDTRIDTGAVENSLHAVDLKVENGVEDMEQNVGKMLAFTTENEK 236

Query: 56  NPKTEANWIEAPVLRYVRIRQSTNDNTERRAVVELWVKLGSIHEKAQFTLADRSQMTHPV 115
               E   + A ++    IR +    +E R +VEL V       K +  L DR++MT+ +
Sbjct: 237 G---ETKRVHARIVETSLIRNA--QGSEVRYMVELNVGEPGREYKVKVNLRDRTKMTNKL 291

Query: 116 LLGREFIRDIALVDVSR 132
           L+GR +++   LVDV++
Sbjct: 292 LIGRNWLQGHYLVDVAK 308