Pairwise Alignments

Query, 502 a.a., gonadoliberin III from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., hypothetical protein from Pseudomonas stutzeri RCH2

 Score =  313 bits (802), Expect = 9e-90
 Identities = 183/503 (36%), Positives = 293/503 (58%), Gaps = 14/503 (2%)

Query: 9   ISVFLLFATGITLSVLRHQDYGVPWTPGETRQVWDIEARIEFAAQGKE-AKVSLAAPLTQ 67
           + +FLL A GI+++  +    G+P T  ET  +W+I+A++EF A  +E  K+ +  P   
Sbjct: 10  VLIFLLVALGISITAYQIFVLGIPVTEDETDDLWNIDAKVEFQASPREPVKLQMYVPPLN 69

Query: 68  EGYTLINETASSPGYGISYLNTESGRRIEWSIRQASGPQTIYYKAQFLVDPQAKAVQIPP 127
           + +  +NE+  S  YG+S    +  RR+ WS R+ASG QT+YY+   ++  +    Q   
Sbjct: 70  QEFVSLNESFISNNYGVSVNRVDGNRRVTWSARRASGNQTLYYR--LVLTKRYSGEQTKA 127

Query: 128 TQPITKPAF--DGPEESAAIALIDSASQRSADHVTFARELIKGLNDSESQNASLLLNK-- 183
           T PI + +   +G E+ AA AL+    Q SAD  TF  E IK +N+    N  LLL    
Sbjct: 128 TGPIFRDSIPVEGAEKIAAEALLSPIRQHSADVETFISEAIKRVNNPNDDNVKLLLGGDT 187

Query: 184 --MSKVDATQKLLSYALVPNKVVGVIQLEDGRRRQSIQHMNEVWNGSAWILFNPETGTQP 241
              +K    + LLS A VP + V  I+L +  + Q+ +     +NG  W+ FNP TG Q 
Sbjct: 188 SIPNKARVIELLLSIAHVPMERVHTIRL-NADQPQTPELWLRSFNGDKWLFFNPGTGEQG 246

Query: 242 THPNLLVWDESNVSLLDVVGGQNSQVMFSMISQKVSP---QQATDSKVEADGLLNLSIHS 298
              + LVW   +  L+ + GG+N QV F++ + +++     + TD   EA G L  S++ 
Sbjct: 247 LPNDRLVWWTGDEPLISLEGGRNPQVTFTLNNSEMNAIRLAKLTDENTEA-GFLEYSLYG 305

Query: 299 LPLEEQAMFKTIMLIPIGALIVVFLRVIVGLKTSGTFMPVLIAVAFVQTQLTTGIVGFLL 358
           LPL+ Q  ++ +++IPIG L+++ LR + GL+T GTF PVLIA+AF +TQ+  GI+ F L
Sbjct: 306 LPLQTQQTYQIMIMIPIGVLVILILRNLGGLQTLGTFTPVLIALAFRETQIGFGIILFTL 365

Query: 359 IVGTGLIIRSYLSKLNLLLVARISAVIITVILIISVFTVVAFKVGLTEGLTITFFPMIIL 418
           I   GL +RSYL  L L ++ R+S V+  V+++I+V ++++ K+GL  GL+++ FPM+IL
Sbjct: 366 ITALGLSLRSYLEHLKLQMLPRLSVVLTFVVVLIAVISLLSHKLGLERGLSVSLFPMVIL 425

Query: 419 SWTIERMSILWEEEGAKEVLLQGGGSLFTAILIYLAMTNTYVQHLTFNFIGLQLVVLAAI 478
           + TIER+SI WEE G         G+L  A L ++ M    + +  F F  + L+++  +
Sbjct: 426 TMTIERLSITWEERGGGHAFKVAVGTLIAASLAFMLMNIRELTYFIFTFPAVLLIMVGFM 485

Query: 479 LLLGTYTGYRISELRRFKPLVEE 501
           L +G Y GYR++EL RFK  +++
Sbjct: 486 LAMGRYRGYRLTELFRFKAFLKD 508